diff --git a/.cargo/config.toml b/.cargo/config.toml new file mode 100644 index 0000000..d47f983 --- /dev/null +++ b/.cargo/config.toml @@ -0,0 +1,11 @@ +[target.x86_64-apple-darwin] +rustflags = [ + "-C", "link-arg=-undefined", + "-C", "link-arg=dynamic_lookup", +] + +[target.aarch64-apple-darwin] +rustflags = [ + "-C", "link-arg=-undefined", + "-C", "link-arg=dynamic_lookup", +] diff --git a/.gitattributes b/.gitattributes new file mode 100644 index 0000000..022809c --- /dev/null +++ b/.gitattributes @@ -0,0 +1 @@ +*.npz filter=lfs diff=lfs merge=lfs -text diff --git a/.github/workflows/python.yaml b/.github/workflows/python.yaml index 1e65631..adc8649 100644 --- a/.github/workflows/python.yaml +++ b/.github/workflows/python.yaml @@ -9,15 +9,14 @@ on: jobs: build-python: - name: Build python package for ${{ matrix.os }} with Python ${{ matrix.python-version }} via Poetry ${{ matrix.poetry-version }} + name: Build python package for ${{ matrix.os }} with Python ${{ matrix.python-version }} via uv runs-on: ${{ matrix.os }} timeout-minutes: 30 strategy: fail-fast: false matrix: - python-version: ["3.11", "3.12", "3.13"] - os: [ubuntu-latest, windows-latest] - poetry-version: ["latest"] + python-version: ["3.11", "3.12", "3.13", "3.14"] + os: [ubuntu-latest, windows-latest, macos-latest] steps: - uses: actions/checkout@v5 @@ -25,28 +24,25 @@ jobs: uses: actions/setup-python@v6 with: python-version: ${{ matrix.python-version }} + - name: Set up uv + uses: astral-sh/setup-uv@v5 + with: + enable-cache: true - name: Install Act dependencies if: ${{ env.ACT }} run: | apt-get update && apt-get install sudo -y cargo - - name: Run poetry image - uses: abatilo/actions-poetry@v4 - with: - poetry-version: ${{ matrix.poetry-version }} - - name: Ensure lockfile is updated - run: | - poetry lock - name: Install python dependencies run: | - poetry install + uv sync --group dev - name: Build rust package run: | - poetry run maturin develop + uv run maturin develop - name: Test with pytest env: PYTEST_ADDOPTS: "--cov read_aconity_layers --cov-report=lcov" run: | - poetry run pytest + uv run pytest - name: Upload coverage to Coveralls uses: coverallsapp/github-action@master diff --git a/.github/workflows/rust.yaml b/.github/workflows/rust.yaml index 79a0a2e..6dd2228 100644 --- a/.github/workflows/rust.yaml +++ b/.github/workflows/rust.yaml @@ -17,14 +17,14 @@ jobs: timeout-minutes: 30 strategy: matrix: - os: [ubuntu-latest, windows-latest] + os: [ubuntu-latest, windows-latest, macos-latest] steps: - uses: actions/checkout@v5 - name: Set up Python uses: actions/setup-python@v6 with: - python-version: "3.12" + python-version: "3.14" - name: Install Act dependencies if: ${{ env.ACT }} run: | diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml index 3e74fbc..ddb1c55 100644 --- a/.pre-commit-config.yaml +++ b/.pre-commit-config.yaml @@ -1,67 +1,56 @@ default_language_version: - python: python3.12 + python: python3.13 repos: - - repo: https://github.com/astral-sh/ruff-pre-commit - rev: v0.11.11 - hooks: - - id: ruff - types: [python] - exclude: docs/ - - id: ruff-format - types: [python] - - - repo: https://github.com/pre-commit/mirrors-mypy - rev: v1.15.0 - hooks: - - id: mypy - types: [python] - exclude: docs/ - - repo: https://github.com/doublify/pre-commit-rust rev: v1.0 hooks: - - id: fmt - - id: cargo-check + - id: fmt + - id: cargo-check - - repo: https://github.com/python-poetry/poetry - rev: "2.1.3" + - repo: https://github.com/astral-sh/uv-pre-commit + rev: 0.11.22 hooks: - - id: poetry-check - - id: poetry-install - - id: poetry-lock + - id: uv-lock + - id: uv-export - - repo: https://github.com/python-poetry/poetry-plugin-export - rev: 1.9.0 + - repo: https://github.com/astral-sh/ruff-pre-commit + rev: v0.15.18 hooks: - - id: poetry-export - args: ["-f", "requirements.txt", "-o", "./requirements.txt"] + - id: ruff-check + exclude: docs/ + - id: ruff-format + + - repo: https://github.com/astral-sh/ty-pre-commit + rev: v0.0.51 + hooks: + - id: ty - repo: local hooks: - - id: build-readme - name: build-readme - entry: | - bash -c 'cat docs/readme_top.rst docs/readme_bottom.rst > README.rst' - language: system - files: 'docs/readme*.rst' + - id: build-readme + name: build-readme + entry: | + bash -c 'cat docs/readme_top.rst docs/readme_bottom.rst > README.rst' + language: system + files: "docs/readme*.rst" - repo: local hooks: - - id: version-bump-check - name: version-bump-check - entry: | - bash -c ' - current_version=$(grep "^version = " Cargo.toml | sed "s/version = \"\(.*\)\"/\1/"); - git fetch origin main 2>/dev/null || true; - remote_version=$(git show origin/main:Cargo.toml 2>/dev/null | grep "^version = " | sed "s/version = \"\(.*\)\"/\1/" || echo "0.0.0"); - if [ "$current_version" = "$remote_version" ]; then - echo "❌ Version must be bumped before push! Run: cargo bump patch|minor|major"; - echo "Local: $current_version, Remote: $remote_version"; - exit 1; - fi; - echo "✅ Version bumped: $remote_version -> $current_version" - ' - language: system - files: 'Cargo\.toml$' - stages: [pre-push] + - id: version-bump-check + name: version-bump-check + entry: | + bash -c ' + current_version=$(grep "^version = " Cargo.toml | sed "s/version = \"\(.*\)\"/\1/"); + git fetch origin main 2>/dev/null || true; + remote_version=$(git show origin/main:Cargo.toml 2>/dev/null | grep "^version = " | sed "s/version = \"\(.*\)\"/\1/" || echo "0.0.0"); + if [ "$current_version" = "$remote_version" ]; then + echo "❌ Version must be bumped before push! Run: cargo bump patch|minor|major"; + echo "Local: $current_version, Remote: $remote_version"; + exit 1; + fi; + echo "✅ Version bumped: $remote_version -> $current_version" + ' + language: system + files: 'Cargo\.toml$' + stages: [pre-push] diff --git a/.python-version b/.python-version new file mode 100644 index 0000000..6324d40 --- /dev/null +++ b/.python-version @@ -0,0 +1 @@ +3.14 diff --git a/.readthedocs.yaml b/.readthedocs.yaml index 5d2fa78..10ab095 100644 --- a/.readthedocs.yaml +++ b/.readthedocs.yaml @@ -7,13 +7,13 @@ build: rust: "1.86" jobs: pre_create_environment: - - asdf plugin add poetry - - asdf install poetry latest - - asdf global poetry latest + - asdf plugin add uv + - asdf install uv latest + - asdf global uv latest - asdf plugin add just - asdf install just latest - asdf global just latest create_environment: - - poetry install --with dev,docs + - uv sync --group dev --group docs install: - PATH="$PATH:$HOME/.asdf/installs/rust/1.86.0/bin" just docs html_out $READTHEDOCS_OUTPUT diff --git a/Cargo.toml b/Cargo.toml index 1d5fa22..4c10fca 100644 --- a/Cargo.toml +++ b/Cargo.toml @@ -1,7 +1,7 @@ [package] name = "read_aconity_layers" -version = "0.4.10" -edition = "2021" +version = "0.5.0" +edition = "2024" [lib] name = "read_aconity_layers" diff --git a/devenv.lock b/devenv.lock index cb7b2eb..c06f448 100644 --- a/devenv.lock +++ b/devenv.lock @@ -3,10 +3,11 @@ "devenv": { "locked": { "dir": "src/modules", - "lastModified": 1748361913, + "lastModified": 1781800860, + "narHash": "sha256-LrEo0eC5ckMvjpBRCuk5q5/vjItKlxnb4n/clHNRZlk=", "owner": "cachix", "repo": "devenv", - "rev": "b510085f1ca92779782d1e3de631b2292a30edb2", + "rev": "d59d872d80876d9eeb3e214d3b088bc4a14a9c4f", "type": "github" }, "original": { @@ -35,10 +36,11 @@ "flake-compat_2": { "flake": false, "locked": { - "lastModified": 1747046372, + "lastModified": 1767039857, + "narHash": "sha256-vNpUSpF5Nuw8xvDLj2KCwwksIbjua2LZCqhV1LNRDns=", "owner": "edolstra", "repo": "flake-compat", - "rev": "9100a0f413b0c601e0533d1d94ffd501ce2e7885", + "rev": "5edf11c44bc78a0d334f6334cdaf7d60d732daab", "type": "github" }, "original": { @@ -112,10 +114,11 @@ ] }, "locked": { - "lastModified": 1746223523, + "lastModified": 1781070343, + "narHash": "sha256-wXAybU+2LlbXm9cfRDHRPASakq60rLvZBXVT2Ahkj1U=", "owner": "cachix", "repo": "nixpkgs-python", - "rev": "3f5f1dbe0122a1741907aa5ab76f7337ffcd2ccb", + "rev": "23629493653be6df0472a46b1be1d65cbd6df55b", "type": "github" }, "original": { @@ -124,12 +127,33 @@ "type": "github" } }, - "nixpkgs_2": { + "nixpkgs-src": { + "flake": false, "locked": { - "lastModified": 1746807397, + "lastModified": 1781454065, + "narHash": "sha256-d2xfDjnfRuf/xYGdu9VVRHiav/2w5hDL/5cw2TuVAXw=", + "owner": "NixOS", + "repo": "nixpkgs", + "rev": "9eac87a12312b8f60dd52e1c6e1a265f6fc7f5fc", + "type": "github" + }, + "original": { + "owner": "NixOS", + "ref": "nixpkgs-unstable", + "repo": "nixpkgs", + "type": "github" + } + }, + "nixpkgs_2": { + "inputs": { + "nixpkgs-src": "nixpkgs-src" + }, + "locked": { + "lastModified": 1781620901, + "narHash": "sha256-UF6scQlG+6lRkZBUpn/3KNavhOo5G8kDWhjVHcno8uc=", "owner": "cachix", "repo": "devenv-nixpkgs", - "rev": "c5208b594838ea8e6cca5997fbf784b7cca1ca90", + "rev": "2df109b343d3c68efd752e32a444a1d9b9f89afa", "type": "github" }, "original": { diff --git a/devenv.nix b/devenv.nix index 57b4547..233fdb2 100644 --- a/devenv.nix +++ b/devenv.nix @@ -9,21 +9,28 @@ act cargo-bump git + git-lfs pre-commit ruff ]; env.NIX_LD_LIBRARY_PATH = lib.makeLibraryPath (with pkgs; [ stdenv.cc.cc + zlib ]); env.NIX_LD = lib.fileContents "${pkgs.stdenv.cc}/nix-support/dynamic-linker"; + enterShell = '' + unset PYTHONPATH + ''; + languages = { python = { - version = "3.13"; + version = "3.14"; enable = true; - poetry = { + uv = { enable = true; + sync.enable = true; }; }; }; diff --git a/docs/development.rst b/docs/development.rst index 7ee8f22..747ae1d 100644 --- a/docs/development.rst +++ b/docs/development.rst @@ -14,7 +14,7 @@ Prerequisites - Rust 1.70+ with Cargo - Python 3.11+ -- Poetry +- uv - Git Environment Setup @@ -31,19 +31,19 @@ Environment Setup .. code:: bash - poetry install --with dev,docs + uv sync --group dev --group docs #. **Setup pre-commit hooks:** .. code:: bash - poetry run pre-commit install + uv run pre-commit install #. **Build the Rust extension:** .. code:: bash - poetry run maturin develop + uv run maturin develop ************************ Code Style and Quality @@ -55,7 +55,7 @@ Python Code =========== - **Ruff**: For linting and formatting -- **MyPy**: For type checking +- **ty**: For type checking - **Pytest**: For testing Run quality checks: @@ -63,14 +63,14 @@ Run quality checks: .. code:: bash # Format and lint Python code - poetry run ruff format . - poetry run ruff check . + uv run ruff format . + uv run ruff check . # Type checking - poetry run mypy . + uv run ty check # Run tests - poetry run pytest + uv run pytest Rust Code ========= @@ -105,10 +105,10 @@ Running Tests .. code:: bash # Run all tests - poetry run pytest + uv run pytest # Run with coverage - poetry run pytest --cov=read_aconity_layers + uv run pytest --cov=read_aconity_layers # Run Rust tests cargo test @@ -144,14 +144,14 @@ Building Documentation .. code:: bash # Install documentation dependencies - poetry install --with docs + uv sync --group docs # Build documentation cd docs make html # Or build manually - poetry run sphinx-build -b html . _build/html + uv run sphinx-build -b html . _build/html # Serve locally (optional) make serve @@ -199,9 +199,8 @@ The project uses pre-commit hooks that run automatically: - Code formatting (Ruff, rustfmt) - Linting (Ruff, Clippy) -- Type checking (MyPy) +- Type checking (ty) - Version bump validation -- Poetry validation These checks must pass before commits are accepted. @@ -253,7 +252,7 @@ Adding a New Function #. **Implement in Rust** (``src/rust_fn/mod.rs``) #. **Add Python binding** (``src/lib.rs``) -#. **Update type stubs** (``read_layers.pyi``) +#. **Update type stubs** (``read_aconity_layers.pyi``) #. **Add tests** for both Rust and Python #. **Update documentation** @@ -262,8 +261,7 @@ Debugging Build Issues - **Check Rust version**: Must be 1.70+ - **Verify PyO3 compatibility**: Should match Python version -- **Clear build cache**: ``cargo clean`` and ``poetry env remove - --all`` +- **Clear build cache**: ``cargo clean`` and ``rm -rf .venv`` - **Check dependencies**: Ensure all dev dependencies are installed Profiling Performance diff --git a/docs/installation.rst b/docs/installation.rst index 9152081..2c48baf 100644 --- a/docs/installation.rst +++ b/docs/installation.rst @@ -28,7 +28,7 @@ Prerequisites - Rust 1.70 or higher - Python 3.11 or higher -- Poetry (for development) +- uv (for development) Build Steps =========== @@ -44,19 +44,19 @@ Build Steps .. code:: bash - poetry install + uv sync #. Build the Rust extension: .. code:: bash - poetry run maturin develop + uv run maturin develop #. Run tests to verify installation: .. code:: bash - poetry run pytest + uv run pytest ************************** Development Installation @@ -66,12 +66,12 @@ For development work, you'll also want the development dependencies: .. code:: bash - poetry install --with dev,docs + uv sync --group dev --group docs This installs additional tools for: - Code formatting (ruff) -- Type checking (mypy) +- Type checking (ty) - Testing (pytest) - Documentation building (sphinx) diff --git a/docs/justfile b/docs/justfile index ce24105..9fe84fd 100644 --- a/docs/justfile +++ b/docs/justfile @@ -1,7 +1,7 @@ # Justfile for Sphinx documentation _sphinxopts := "" -_sphinxbuild := "poetry run sphinx-build" +_sphinxbuild := "uv run sphinx-build" _sourcedir := "." _builddir := "./_build" @@ -23,7 +23,7 @@ ensure-rustdocgen: build-extension: @echo "Checking Rust toolchain..." @which cargo > /dev/null || (echo "Error: Rust/Cargo not found. Please install Rust toolchain." && exit 1) - cd .. && poetry run maturin develop + cd .. && uv run maturin develop # Clean build directory clean builddir=_builddir: @@ -45,7 +45,7 @@ serve sphinxbuild=_sphinxbuild sourcedir=_sourcedir builddir=_builddir sphinxopt # Build documentation with live reload (requires sphinx-autobuild) livehtml sourcedir=_sourcedir builddir=_builddir sphinxopts=_sphinxopts: ensure-rustdocgen build-extension - poetry run sphinx-autobuild "{{sourcedir}}" "{{builddir}}/html" {{sphinxopts}} + uv run sphinx-autobuild "{{sourcedir}}" "{{builddir}}/html" {{sphinxopts}} # Check for broken links linkcheck sphinxbuild=_sphinxbuild sourcedir=_sourcedir builddir=_builddir sphinxopts=_sphinxopts: diff --git a/poetry.lock b/poetry.lock deleted file mode 100644 index 834e67f..0000000 --- a/poetry.lock +++ /dev/null @@ -1,1799 +0,0 @@ -# This file is automatically @generated by Poetry 2.1.2 and should not be changed by hand. - -[[package]] -name = "accessible-pygments" -version = "0.0.5" -description = "A collection of accessible pygments styles" -optional = false -python-versions = ">=3.9" -groups = ["docs"] -files = [ - 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= false - -[tool.poetry.urls] +[project.urls] repository = "https://github.com/Cian-H/read_aconity_layers" documentation = "https://read-aconity-layers.readthedocs.io/" - -[tool.poetry.dependencies] -python = "^3.11" -maturin = "^1.8.6" -numpy = ">=2.0.0,<3.0.0" - -[tool.poetry.group.dev.dependencies] -ruff = ">=0.11.11,<0.16.0" -mypy = ">=1.15,<3.0" -pytest = ">=8.3.5,<10.0.0" -loguru = "^0.7.3" -pytest-cov = ">=6.1.1,<8.0.0" - -[tool.poetry.group.docs.dependencies] -sphinx = "^8.2.3" -sphinx-autodoc-typehints = "^3.2.0" -sphinx-copybutton = "^0.5.2" -sphinxcontrib-rust = ">=0.8.1,<1.2.0" -myst-parser = "^4.0.1" -sphinx-autobuild = ">=2024.10.3,<2026.0.0" -pydata-sphinx-theme = ">=0.16.1,<0.20.0" - -[tool.poetry.requires-plugins] -poetry-plugin-export = ">=1.8" +[dependency-groups] +dev = [ + "ruff>=0.11.11,<0.16.0", + "ty>=0.0.51", + "pytest>=8.3.5,<10.0.0", + "loguru>=0.7.3", + "pytest-cov>=6.1.1,<8.0.0", + "maturin>=1.8.6", +] +docs = [ + "sphinx>=8.2.3", + "sphinx-autodoc-typehints>=3.2.0", + "sphinx-copybutton>=0.5.2", + "sphinxcontrib-rust>=0.8.1,<1.2.0", + "myst-parser>=4.0.1", + "sphinx-autobuild>=2024.10.3,<2026.0.0", + "pydata-sphinx-theme>=0.16.1,<0.20.0", +] [build-system] -requires = ["maturin>=1.7,<2.0"] +requires = ["maturin>=1.14,<2.0"] build-backend = "maturin" [tool.maturin] @@ -217,11 +206,9 @@ max-complexity = 10 [tool.ruff.lint.flake8-annotations] mypy-init-return = true -[tool.mypy] -check_untyped_defs = true -ignore_missing_imports = true -exclude = ["docs/", "tests/"] +[tool.ty] +[tool.ty.src] +exclude = ["docs/"] [tool.pytest.ini_options] testpaths = ["tests"] -pythonpath = [".venv/bin/python"] diff --git a/read_layers.pyi b/read_aconity_layers.pyi similarity index 100% rename from read_layers.pyi rename to read_aconity_layers.pyi diff --git a/requirements.txt b/requirements.txt index 6089726..01a4ae6 100644 --- a/requirements.txt +++ b/requirements.txt @@ -1,70 +1,311 @@ -maturin==1.8.7 ; python_version >= "3.11" and python_version < "4.0" \ - --hash=sha256:15ec5919b334e421e97623446907a3f994fc04427ab2c9e5eab5a461565e6ce3 \ - --hash=sha256:20813b2262661a403fc0c695e3d4836257f992927fa2234928eb3510b13de2cd \ - --hash=sha256:272f34df99ff9be27174b0d2afaec98bac5217670bceddd796f45a0095849dd9 \ - --hash=sha256:43526cc7fdc025b0d134b09d2cdbbe8fe816c4d72351822fa967d36784764bab \ - --hash=sha256:5e134fc67e7f28e9f57d01dc2603c243456f80e76f93ef54ee61a4403dccd7e3 \ - --hash=sha256:834c2f8029c1e19e272b360102eead74fdb6df93d1cb6e645d6aeaec86b532f6 \ - --hash=sha256:8766377b5339b354fc83195ee1d9879db2b1323ea485305c6932f97b1661334d \ - --hash=sha256:96c76353f94a153c5dc1a9d3916e75fcd17e6bf216a06dcdc2f84b9f98f374af \ - --hash=sha256:987b4e821c5ec2b5c6d75f4fcb6141d6418188356c3ff229c67f58c11ae54ded \ - --hash=sha256:b560b86d6119c82430f9682f76708b3ea4984e5976afab6b844c9c8094709f78 \ - --hash=sha256:c39f288b72ceae9274e612131c8a1a18bc248170910e27eb39956ffbd62bd712 \ - --hash=sha256:ec37762228b76d4763e0ad18f7d70d8dbe52298ecdb0737bb4fd383a49fc2f06 \ - --hash=sha256:ef44ade7b2401ebbd4b0d268e4b953b4256295c827a21e806a51d29f629ab638 -numpy==2.2.6 ; python_version >= "3.11" and python_version < "4.0" \ - --hash=sha256:038613e9fb8c72b0a41f025a7e4c3f0b7a1b5d768ece4796b674c8f3fe13efff \ - --hash=sha256:0678000bb9ac1475cd454c6b8c799206af8107e310843532b04d49649c717a47 \ - --hash=sha256:0811bb762109d9708cca4d0b13c4f67146e3c3b7cf8d34018c722adb2d957c84 \ - --hash=sha256:0b605b275d7bd0c640cad4e5d30fa701a8d59302e127e5f79138ad62762c3e3d \ - --hash=sha256:0bca768cd85ae743b2affdc762d617eddf3bcf8724435498a1e80132d04879e6 \ - --hash=sha256:1bc23a79bfabc5d056d106f9befb8d50c31ced2fbc70eedb8155aec74a45798f \ - --hash=sha256:287cc3162b6f01463ccd86be154f284d0893d2b3ed7292439ea97eafa8170e0b \ - --hash=sha256:37c0ca431f82cd5fa716eca9506aefcabc247fb27ba69c5062a6d3ade8cf8f49 \ - --hash=sha256:37e990a01ae6ec7fe7fa1c26c55ecb672dd98b19c3d0e1d1f326fa13cb38d163 \ - --hash=sha256:389d771b1623ec92636b0786bc4ae56abafad4a4c513d36a55dce14bd9ce8571 \ - --hash=sha256:3d70692235e759f260c3d837193090014aebdf026dfd167834bcba43e30c2a42 \ - --hash=sha256:41c5a21f4a04fa86436124d388f6ed60a9343a6f767fced1a8a71c3fbca038ff \ - --hash=sha256:481b49095335f8eed42e39e8041327c05b0f6f4780488f61286ed3c01368d491 \ - --hash=sha256:4eeaae00d789f66c7a25ac5f34b71a7035bb474e679f410e5e1a94deb24cf2d4 \ - --hash=sha256:55a4d33fa519660d69614a9fad433be87e5252f4b03850642f88993f7b2ca566 \ - --hash=sha256:5a6429d4be8ca66d889b7cf70f536a397dc45ba6faeb5f8c5427935d9592e9cf \ - --hash=sha256:5bd4fc3ac8926b3819797a7c0e2631eb889b4118a9898c84f585a54d475b7e40 \ - --hash=sha256:5beb72339d9d4fa36522fc63802f469b13cdbe4fdab4a288f0c441b74272ebfd \ - --hash=sha256:6031dd6dfecc0cf9f668681a37648373bddd6421fff6c66ec1624eed0180ee06 \ - --hash=sha256:71594f7c51a18e728451bb50cc60a3ce4e6538822731b2933209a1f3614e9282 \ - --hash=sha256:74d4531beb257d2c3f4b261bfb0fc09e0f9ebb8842d82a7b4209415896adc680 \ - --hash=sha256:7befc596a7dc9da8a337f79802ee8adb30a552a94f792b9c9d18c840055907db \ - --hash=sha256:894b3a42502226a1cac872f840030665f33326fc3dac8e57c607905773cdcde3 \ - --hash=sha256:8e41fd67c52b86603a91c1a505ebaef50b3314de0213461c7a6e99c9a3beff90 \ - --hash=sha256:8e9ace4a37db23421249ed236fdcdd457d671e25146786dfc96835cd951aa7c1 \ - --hash=sha256:8fc377d995680230e83241d8a96def29f204b5782f371c532579b4f20607a289 \ - --hash=sha256:9551a499bf125c1d4f9e250377c1ee2eddd02e01eac6644c080162c0c51778ab \ - --hash=sha256:b0544343a702fa80c95ad5d3d608ea3599dd54d4632df855e4c8d24eb6ecfa1c \ - --hash=sha256:b093dd74e50a8cba3e873868d9e93a85b78e0daf2e98c6797566ad8044e8363d \ - --hash=sha256:b412caa66f72040e6d268491a59f2c43bf03eb6c96dd8f0307829feb7fa2b6fb \ - --hash=sha256:b4f13750ce79751586ae2eb824ba7e1e8dba64784086c98cdbbcc6a42112ce0d \ - --hash=sha256:b64d8d4d17135e00c8e346e0a738deb17e754230d7e0810ac5012750bbd85a5a \ - --hash=sha256:ba10f8411898fc418a521833e014a77d3ca01c15b0c6cdcce6a0d2897e6dbbdf \ - --hash=sha256:bd48227a919f1bafbdda0583705e547892342c26fb127219d60a5c36882609d1 \ - --hash=sha256:c1f9540be57940698ed329904db803cf7a402f3fc200bfe599334c9bd84a40b2 \ - --hash=sha256:c820a93b0255bc360f53eca31a0e676fd1101f673dda8da93454a12e23fc5f7a \ - --hash=sha256:ce47521a4754c8f4593837384bd3424880629f718d87c5d44f8ed763edd63543 \ - --hash=sha256:d042d24c90c41b54fd506da306759e06e568864df8ec17ccc17e9e884634fd00 \ - --hash=sha256:de749064336d37e340f640b05f24e9e3dd678c57318c7289d222a8a2f543e90c \ - --hash=sha256:e1dda9c7e08dc141e0247a5b8f49cf05984955246a327d4c48bda16821947b2f \ - --hash=sha256:e29554e2bef54a90aa5cc07da6ce955accb83f21ab5de01a62c8478897b264fd \ - --hash=sha256:e3143e4451880bed956e706a3220b4e5cf6172ef05fcc397f6f36a550b1dd868 \ - --hash=sha256:e8213002e427c69c45a52bbd94163084025f533a55a59d6f9c5b820774ef3303 \ - --hash=sha256:efd28d4e9cd7d7a8d39074a4d44c63eda73401580c5c76acda2ce969e0a38e83 \ - --hash=sha256:f0fd6321b839904e15c46e0d257fdd101dd7f530fe03fd6359c1ea63738703f3 \ - --hash=sha256:f1372f041402e37e5e633e586f62aa53de2eac8d98cbfb822806ce4bbefcb74d \ - --hash=sha256:f2618db89be1b4e05f7a1a847a9c1c0abd63e63a1607d892dd54668dd92faf87 \ - --hash=sha256:f447e6acb680fd307f40d3da4852208af94afdfab89cf850986c3ca00562f4fa \ - --hash=sha256:f92729c95468a2f4f15e9bb94c432a9229d0d50de67304399627a943201baa2f \ - --hash=sha256:f9f1adb22318e121c5c69a09142811a201ef17ab257a1e66ca3025065b7f53ae \ - --hash=sha256:fc0c5673685c508a142ca65209b4e79ed6740a4ed6b2267dbba90f34b0b3cfda \ - --hash=sha256:fc7b73d02efb0e18c000e9ad8b83480dfcd5dfd11065997ed4c6747470ae8915 \ - --hash=sha256:fd83c01228a688733f1ded5201c678f0c53ecc1006ffbc404db9f7a899ac6249 \ - --hash=sha256:fe27749d33bb772c80dcd84ae7e8df2adc920ae8297400dabec45f0dedb3f6de \ - --hash=sha256:fee4236c876c4e8369388054d02d0e9bb84821feb1a64dd59e137e6511a551f8 +# This file was autogenerated by uv via the following command: +# uv export --frozen --output-file=requirements.txt +-e . +colorama==0.4.6 ; sys_platform == 'win32' \ + --hash=sha256:08695f5cb7ed6e0531a20572697297273c47b8cae5a63ffc6d6ed5c201be6e44 \ + --hash=sha256:4f1d9991f5acc0ca119f9d443620b77f9d6b33703e51011c16baf57afb285fc6 + # via + # loguru + # pytest +coverage==7.14.1 \ + --hash=sha256:0177614a0370f227888b4e436a7c55686d6a9f90eb1ade2b624ba685a1686e86 \ + --hash=sha256:01b7733daad0237daa01ef80fe2dfceffc911e6a17fa7b55d14aa8214eaaaecd \ + --hash=sha256:03a6f93c1ec3b7f2e77b5dbcc5573a2c21f12529a5c6bbe0f16f72303cc2fa4d \ + --hash=sha256:042c46ded7c288aeb07cf14a28b6c1e10b78fcba40171c3fa1e939377eeef0b5 \ + --hash=sha256:06144cd511cf2624873a035c5069cf297144f6e77a73ee3d7a55b605ec5efb42 \ + --hash=sha256:07c6290b1697b862c0478eab545eec949a0d0e4d6d03497f446d706da3b4f2de \ + --hash=sha256:10274a1fbeb8ec5d72966e17bb198a3104257aca4ac09d98667c5f8aca8c8548 \ + --hash=sha256:1101a5ebb083aecb625ebb6209d4105b58f647b093cb2dc8122d7b33f743cfe1 \ + --hash=sha256:114c95ef29302423b87d159075805f4ab973254a2638a5d7d046c94887cc87d7 \ + --hash=sha256:12c42ec1e14f553c4f817e989365982e646e27211f10a0f717855b94a79c8906 \ + --hash=sha256:145986fe66647eb489f18d9a997567a3fd358584c4b5a808769113abc07466af \ + --hash=sha256:17a5a241e5997621a956a7f402a7433ef4221e5152809b785bec79e2323799f1 \ + --hash=sha256:1896f5e19ff3f0431c7ce2172adc54890fd97f86b59ced8ca1649145d9ffe35d \ + --hash=sha256:196a13319ad88d6d8ef5ab489ec4f44ddde2143c0c7d5b27786f6c3ffd56a7e1 \ + --hash=sha256:221c70f316241a78e77e607c227cefc8808d4e08f28d99c04f35694690e940be \ + --hash=sha256:2222be86d0b54f5dd5a38f45f17f315f737245e857bf0bdedc70734f84a13c02 \ + --hash=sha256:2224f89ffd0c5605ccce1ed7a584da162bc7c55f601ab1c946bc9de31a486b42 \ + --hash=sha256:23bf7fa51ac02e07fc7c96849b82946da47ae862dc8f86d183b2a4864fc38129 \ + --hash=sha256:2d69af5dea2de76fc485a83032a630523f985198b7e25be901ec60181587b01e \ + --hash=sha256:30c08f7d90415aa98b3c990385dea2939b0da55f38515e5b369b83655f8523be \ + --hash=sha256:357d4e32935c36588aaba057d734fa32428c360c9fc2e4442afbf1b646beee6e \ + --hash=sha256:35ab22d91de736e8966b980dc355cbcdd2c6dbbcfe275f9a2991bc8a91b3df65 \ + --hash=sha256:370c5afae3fa0658e11694a32b24c2778f6bc2d17718121f94ee185e69f26b54 \ + --hash=sha256:3758dd0a7f1fa57365ef2e781df0f0731d38b6e3772259d13dae4bd8a958d4b1 \ + --hash=sha256:39b21e212c55af06fa375e3dbf90a8a8e38792f3a910c580066d23563830ddd5 \ + --hash=sha256:3a56abc20a472baf0304c455721bc601477440d28ecfde8a03dde79ede07e0df \ + --hash=sha256:3d452fd08b5c72c5167c93e6867b5c08500bd40f2a21e1e854a500550b6cc36f \ + --hash=sha256:442cc9c952b2df400cda54bb04ab87330cf2cd08a8692cbbea36773531eb6f37 \ + --hash=sha256:46f714d2fb8ae2f4f29f23ada7f1e79b759fff5a70f94a1dac23af204c3ec9e4 \ + --hash=sha256:478b5bcd63c2e1357c5c7e16c070690df7b07f676b1c114d7b93e533c664309f \ + --hash=sha256:48b283b1dd6372e8de2a7a9a4c4d5dc06f4d4fd209b876f3c88a7a205a0c8f84 \ + --hash=sha256:4a28fd227808366b196a75476dced2eb35b351d6766ba9c858dc93319e87f4f1 \ + --hash=sha256:4ea1c034f95c9b056e856b794630b17f9fa3d57e4800ff1e503d3be0f9c9078c \ + --hash=sha256:51bd64741cc6fa065abd300ede1afe5a5291ece9c31da8b24884deda48bcc3f8 \ + --hash=sha256:54acdb6674a4661768d7bf7db32dfb9f46ab1d764f8aba6df75ce1a6a088724e \ + --hash=sha256:59baf88468dbc8d63b1887afd92bda52e40bb1561696e5819670601403810cec \ + --hash=sha256:5a1c5215be81035e629d5bc756650634d0bf31991038db7a0eccb90f025ce16d \ + --hash=sha256:5b0c99ba93a07d56f6df340bb79be53202a082b2fdb81bfe6190b741a3470d54 \ + --hash=sha256:5ea0c297e27133853b4d8a3eb799bff5a2dbd9f2f41537a240d337ac9b4df890 \ + --hash=sha256:5f0cfc27c539f07cf5c0a4cfe211d0b6cae039f8f40526dbaa71944e64b50a7b \ + --hash=sha256:6223a72fd0e4c7156353ec0f08a5f93623e1d3034d0e2683b9bb8ea674131b1d \ + --hash=sha256:62fd185ef9df3c33d1c8178c5af105f762afbad96038de9a4ae100aa6297ca33 \ + --hash=sha256:6a3cb83d1552c0cd1b4906655b6a33fd4a8473229633a901c6b73bf86914dee9 \ + --hash=sha256:6adc5a36984624a70bf11d7184e20fa0a49aa7c47ffab43804106a1a695ea22e \ + --hash=sha256:6b6b0853b895fe0e98cbfc580d1ec3393d9302b4b1e96a77b3f5c91fdab899e6 \ + --hash=sha256:6ff665fb023a77386fe11685190cee1f60a7d635994a30d9b0a061533d470fce \ + --hash=sha256:7279d2110a28cebc738b6459ecda2771735a4c18465fbbd36b3288fe5ed92247 \ + --hash=sha256:76a085d7005236a767e3426148b2c407e53ad61695c562f8a81da2d373324901 \ + --hash=sha256:7771b601718fdde84832c3a434ca9bbf4ae9adbc49d84198b4110700c3c77c36 \ + --hash=sha256:79058c47dae6788504b5effb319961bcd72d7240551464b91d474bc0ed186d69 \ + --hash=sha256:7af486dabe8954d03b087f0021540897afe084f04e16ff5579e08cc46f871416 \ + --hash=sha256:8011224a62280e50dab346960c03cf47aca1a1e09e608c0fb33fd6e0cc8e9500 \ + --hash=sha256:8270544c361ed405a27a060dbc9ed2c124b084d96dfdc2d9a2510482aef981ad \ + --hash=sha256:84b535f00655ecafe1d929d1fb00ed5d6fa3051ea643ab2c161a3887b86f294b \ + --hash=sha256:851b9e1e4e8a4608e77c79714b2e77c0970d2ed7202a05e92ae407817481887b \ + --hash=sha256:85e85586565842f6932abebd4c18bcb1074223dc0b3576e7d173ca710622813a \ + --hash=sha256:87ebdf787d4888e3f3f2d523eadc6e18c6d18c6d0eb173801a189641627fb37e \ + --hash=sha256:8a3ce026d73290f42f08dafecbd82c193a74df280461fbf97300fec51fd133ee \ + --hash=sha256:9132cd363a68a4c3daa7c8704a654b1e39d3360f6f5b8ddd470608a945236c07 \ + --hash=sha256:99cd41ff91afd94896fea3bc002706b6ae4ce95727d06e4a0f39c0a8d8bd8b1a \ + --hash=sha256:9eeb3fcbc13ba40dfbdb22d01d196a28e9cef9ed4c29b60061a1e0e823a9929d \ + --hash=sha256:a06c76364a9360e33d6d23769aefdf7f66f38e2ffb60ceb1baaa4989d83b695c \ + --hash=sha256:a07891c3f4805442b31b71e84ba3cf29ed1aa9a428284e06deeb4b23e5b46343 \ + --hash=sha256:a24a81f9715ee42ef59a316cc11611c98fe23920f7c81861315c9f3ff4a230f4 \ + --hash=sha256:a252f21c27e38347e60111a3266b03827422a7d5525951aceee313aa68bab1d2 \ + --hash=sha256:a311d8e1da24be5c1ccf85cbfb06315dbaa1703d5a1eab3f6432c72b837917c8 \ + --hash=sha256:aa5e304a873fabddc11e484e9b6b738bd38bd7bed17b09aa84eecf5332e8b8bb \ + --hash=sha256:ab4af6352741a604c431c6072fce5bee33bf0f20dc7a56618d6bf6bb89e9810c \ + --hash=sha256:b553d04b5e778a8e56d57eb134aff42a92718ecba45e79c4764ecfa40efd92ff \ + --hash=sha256:b84800013769a78ccb9ef4659402e26d06867e337b61ec365f77ad008adea80e \ + --hash=sha256:bcaa50684dcaadfa599ac48f81103c756d791cfd85c97203d2217c593d48b860 \ + --hash=sha256:be9f2c802dcfce3f71298303aa5dad0dce440a76c52f2f60dacd8656dab78793 \ + --hash=sha256:c79cead5b5bc584d9c71451cb984d0e3a84e0c0937379c8efcbf27c8d661b851 \ + --hash=sha256:c7e057326434e441306226fbeb5d1aaf14a2637efe97ba668306635835f32ad7 \ + --hash=sha256:ced2f09ef276fd58611a1ef502164ad266d2b75174e5a40cabbdb4033f9f6cf2 \ + --hash=sha256:d13e6725992e2d2fd7d81d4f5241952d13740121dfd501da09201be39b2c003a \ + --hash=sha256:d34d75f892b3ab73ba11cab5442cce7b3e168fd64162b16f0e1e0d09c508edef \ + --hash=sha256:d5b89cdfb2ee051b71e8c3c70bd81a9eff81100f736a269136fe1a68efe00474 \ + --hash=sha256:d5ed429d0b8edaac649e889b4ffcedb6c80b06629a3f93050e3dddfb99235bee \ + --hash=sha256:da028256b04ec30e5e0114b6f76172938c313991f0a2d3d894271315cf5d5e43 \ + --hash=sha256:dcbf65f1f66a26cdd88c35cf68fb4729c5d1cd2e88added72420541dfb212034 \ + --hash=sha256:dd34767fa19848d35659ffc0a75314f58c7af3f1cd87ec521e8292a1238398a3 \ + --hash=sha256:ddf799247318f34dbcd2efa8c95a8d0642674e926bb1774cf9b63dfd2a389d1c \ + --hash=sha256:de286598cc65d2b489411174b1faec2f5a7775fb3201fd925db2a76b4030f37d \ + --hash=sha256:e471bc5769ff073b058cfadb0d736b56ce067c8560eabeb0da88462df98c23e7 \ + --hash=sha256:ea8cd6ca0ee9f616aaef3afc6882e32c2cbf18b00d96313ffd76af650574034d \ + --hash=sha256:f2302660e32562a532b442480121aef8aa61a5bdb20b30bf0adab29f10a5a4b4 \ + --hash=sha256:f497a1ea81d4cd7c10ddcaa685135b9aabd291af3d55775a9ddf3cb7a364cdd9 \ + --hash=sha256:f4ddbe407477f04c45115d1a4e5bc480f753553b534d338d4c3358b1cdd0ea52 \ + --hash=sha256:f747dc8edcfe740130f28f32f3995e955494285717e86ee25af51db2219df08a \ + --hash=sha256:fad54e871165f6ec2f536063ac74c3104508a12963e64072ba44bd822de52b0c \ + --hash=sha256:fd86572566fb40189a8260446158235159bc7a82dfbc87a3b39cf4fb57fcec1c + # via pytest-cov +iniconfig==2.3.0 \ + --hash=sha256:c76315c77db068650d49c5b56314774a7804df16fee4402c1f19d6d15d8c4730 \ + --hash=sha256:f631c04d2c48c52b84d0d0549c99ff3859c98df65b3101406327ecc7d53fbf12 + # via pytest +loguru==0.7.3 \ + --hash=sha256:19480589e77d47b8d85b2c827ad95d49bf31b0dcde16593892eb51dd18706eb6 \ + --hash=sha256:31a33c10c8e1e10422bfd431aeb5d351c7cf7fa671e3c4df004162264b28220c +maturin==1.14.1 \ + --hash=sha256:15cea8fcb3ba47dd636f50092bb34baea8b04ac777392f23e6bf8a9a61efb894 \ + --hash=sha256:1a04de0a20188f95c721b5702eed18140bdcccb28c386797093eca3f62f4d4e0 \ + --hash=sha256:3c9f94640ecc4895e94abaf834a0684430032c865b2748a36c12461fd9252fdd \ + --hash=sha256:522292398945442cdafa9daeb2271b2340fbde57027b818f923f88eab04174f8 \ + --hash=sha256:5282dffd4b539d2be245f4e5b1a5ab6bc1033b58f4a4872f5833f9d43c954aa4 \ + --hash=sha256:994a0c8ba3ad8a92b3a9ee1b02645d200d610216b15cff5102b0fe65e8e08666 \ + --hash=sha256:9d6577a62cd08e0ceba7a0db06fb098e0c9b1b3429bad747a4f3a18215a1b3df \ + --hash=sha256:a131d912b5267e640bc96d70f4914e10590aed64082ec9abacba7cea52004224 \ + --hash=sha256:be18fc568fb76884c0205456336892a75105ec398e6b667cd777c6268bd06d69 \ + --hash=sha256:be80866363e605d137991b491a741a84cde9ae350183c4c85f49690ca9aaaa65 \ + --hash=sha256:cd457cd88961156e26379e1155bd287cc0ec1c8b2f1582b0660fb31b87c8842d \ + --hash=sha256:dfc54ae32e6fcb18302193ab9a30b0b25eefffba994ae13238974805533ef75e \ + --hash=sha256:f3306078070c1508fd715b9116070cbcaff5959024272a9f1e6f5cb29768b86c \ + --hash=sha256:ffe5ad71f21d1e6603c4dd75f7fee34adf5ed5ebcebb692886549888ebb329ed +numpy==2.4.6 \ + --hash=sha256:001fbb8e08d942dd57599e781f2472269ee7f2755fae407b4f67b2f0b17da3f1 \ + --hash=sha256:0280e0356c0829a18d9de1cb7eee50ec22ca639878d7240307ca0943d73cd2c4 \ + --hash=sha256:043191bfa8eab18c776647b62723ac9dddece59743b13f49b2016094129c2b3f \ + --hash=sha256:06ca2f61ec4385a07a6977c55ba998a4466c123642b4a32694d3128fce18c079 \ + --hash=sha256:0a041d3d761dc3c35cc56ce0351506a02bcbc25f7b169f652435141a17db9096 \ + --hash=sha256:0ab0a9c4ffb1a6d95ef519fe4247dba8eb6b18ad93999f76b7f657039acabd47 \ + --hash=sha256:0c9136e14ed34a9e343a31c533d78a9813a69a3148332bce5e9821cb2f996e66 \ + --hash=sha256:110f8b71aacb688ec69062bb7f6938a0f8acb01b7c1c4beb453c65b6d234584d \ + --hash=sha256:112b06a867b235ef466ed3508ddf0238050df9c727cafb5301ac385b899189a1 \ + --hash=sha256:17f9ade344e7d9b464a084d69bcf18fc691cb1db67c62ed80820bf4926d78f0e \ + --hash=sha256:1e254a00cdf42b1e4d5b3d68d33af63268d41340d8885df2ab6470f2e1500147 \ + --hash=sha256:1e978ec1e8bd0e0e4de6bb75de9d30cbb74db6b6a2bb727618613703ca0167dd \ + --hash=sha256:25c692919ac5a01f170a3bfcd62d745b24fd095c353d50812637d6fcab442e75 \ + --hash=sha256:260a5d70215b61ab4fadf5c7baacd64821842975eea312125ed3c39a6391b063 \ + --hash=sha256:2803abfebfc990042cd494d8ce2d5f82e9d847af6d35ec486923aa19dbad5e73 \ + --hash=sha256:29a287e0cf63ff528da061de6b9f64a4618da591ca1046aafc54062e40ca7eab \ + --hash=sha256:29cb7f67d10b479ff07c17d33e39f78c07f71c40ef30d63c153d340e96cd3fb4 \ + --hash=sha256:3213d622a0283a39a93d188f3cf72b26862df52fbb4ca3697f51705016523d41 \ + --hash=sha256:33111801a01c12a8a1e3721f0a9232f8cfc8ae2c6b7098167e6f623c6073f402 \ + --hash=sha256:357cc07a6d7b0b182ff02249616a03742827ebb1277546b5c7cd7f7620a45698 \ + --hash=sha256:38efbc8de75c7a0fc1ac190162d892787f3f47b57cc291231aafee36b80982b7 \ + --hash=sha256:4081eb135ac24158bd51cdfbef16f1c64df7063b1143f24731387137c092bec8 \ + --hash=sha256:40fdc1ae7125e518ea98e53e69a4ebc27e1fd50510c47b7ea130cf21e5e1d42b \ + --hash=sha256:4cfe66903cc32a9921a6733d96b19bb6abf310397581bbad89c228f5abaf0ee8 \ + --hash=sha256:511dbaf848decaaaf4b4ca48032619fb3138710c4bf7da7617765edad1ef96b0 \ + --hash=sha256:55cced7c52e981362f708ad635198e97a752dfba412cc03c23bbf3bd8d5cd662 \ + --hash=sha256:56b39e5e0622a09a25bf5baf62f4bcf0cb8a41ae6e2819cf49bbc5a74c083f91 \ + --hash=sha256:5dbbdb29840ca3d91ee0fece42fc29278886d908280bfec0a5846c6f901a3eb0 \ + --hash=sha256:5f9fb9157b4ce2971008323afe46053787b526ef624fea915b261468a8421a0f \ + --hash=sha256:6180d8b35af935aed8ece3a85e0a43f87393ae0ac87c8d2c8bd2c993f7270ef3 \ + --hash=sha256:68a5124b13fa6cc2086764a20005d30bc0548146f7f5322f02fce212ca14317f \ + --hash=sha256:68bb27509ac1b9a3443094260f6326150663b06abe40b73a2f81160623da5b67 \ + --hash=sha256:6f41ae150c4e32db4f3310cdaf64b1593a03dbabe29eec77fc9b50fe64061df6 \ + --hash=sha256:7265a2f3d436e54ef9f2b52b5c937e6be778781bd97a590319d7348f1c1ca997 \ + --hash=sha256:72fbe16c6fac95aedf5937fa873445cec2110be35d8a4e9433d7501fd98dae6b \ + --hash=sha256:7d92c3819208a60205a12a245c91ad70cb0a85336659b19b834205573ac8456e \ + --hash=sha256:8155154c7c691289fe18f510b5d4657c68c67989f293f0535a91360392ff6538 \ + --hash=sha256:81a1cca95ed5bb92aa8b10dd2cdc9a0d3853a50fad926c28b5d7e8ea54389627 \ + --hash=sha256:89cd468399cfd2504718f0ba50e410dca55a170b61a02ad92bb18c8a65186e93 \ + --hash=sha256:8ad03c0965fb3c692200e74d458ca28c1dbb4ce96f9a479a8aa041ad5fabca02 \ + --hash=sha256:90f9849678c75fe7afa2d348ac842c168b0a4d3d61919687216dfc547976d853 \ + --hash=sha256:948424b06129ce883307e8cff868c31396d8dc7630a59c61d70d98dbe70f222c \ + --hash=sha256:9cd5ffd25db4e7ba6a375693b3fc0fc1791ec636c17db3720da19bde7180ec43 \ + --hash=sha256:a0df0043bdb289bde1f62da130d20df23d58b45429f752bc7a8fc5325a225ecd \ + --hash=sha256:a2c306dea656c12c68f51f4cea133cbe78ca7435eb28c735eac1d3ebe73be6e8 \ + --hash=sha256:a7830bab239b79cda9c08c2da014761cafb48da6150e1da17ac06283f43b6089 \ + --hash=sha256:a7c711e21628b52034bb5ab8d1bce291f752fcc5e92accc615778acee1ff4778 \ + --hash=sha256:aaf159caa35993cb1f56fb9b8e4610d35758e7ca005412eb1daa856a78c9c4b1 \ + --hash=sha256:ae506e6902902557576a26ff33eda8695e7ecb3cb36c3b573a0765dee114ebdb \ + --hash=sha256:b507f5c4c1d508876d1819b6bf9a49d365b96320b5d4993426b33a23ca4b8261 \ + --hash=sha256:bf162abab1c1a736333192707cef898e735a5ca00f38f27eeedf44b39d9e85eb \ + --hash=sha256:c1a2af6c6ef86344a6b0db6b97834208bf598db514f2b155042439b62605601a \ + --hash=sha256:c2d37ab77531417474168eb79d6d80b14f821a966818505d03013d0833edb7a8 \ + --hash=sha256:c4fc99836233ea196540b17ab0983aff60ed07941751930f5f4d05bc3b3b7359 \ + --hash=sha256:d581b735e177fdcdce6fed8e7e8880a3fb6ee4e3653a3ac6af01c6f4c03effc5 \ + --hash=sha256:d6da64deb6b8ed903e7560180a92f2d804ee1ba5eeb849ac2748b8c1aba1f6d7 \ + --hash=sha256:d8e8286dd7cea7895157318d1b91cdacac64c479f3cbc8dce548331728484751 \ + --hash=sha256:ddea102b48f9e339f3948bf22040944184627a30fdf7f858667673b9c5f033c8 \ + --hash=sha256:dfa20cc6ca228e6b155b11da03825975ce66aea520985dbbddf0f2a5a495c605 \ + --hash=sha256:e3e5193ef5a3dc73bceee50f7fdc2c90dbb76c42df8d8fae3d1067a583df579e \ + --hash=sha256:e3eeb0aabd6bd5ce64faae67e9935203a6991b4bc2a485a767fbafb2c5125f45 \ + --hash=sha256:e5805d5a22fd19c8ccff10a9561f9df94436b0545619ea579db2d3c35294bce2 \ + --hash=sha256:e85b752a1e912b70eaad4fafbd4d1238007ab221de2009b9a2f5ae7461239895 \ + --hash=sha256:eaf7fa2de5c0be8ae6ff8e9bea2ccd725e980541244521d8d4b5f3354a27babe \ + --hash=sha256:ebfb099f8dcf083deef3ac1ca4c1503f387cf76296fcb3816b66f5ecb5f54fdb \ + --hash=sha256:ece3d2cfe132e7d51f44a832b303895e6f2d499c5e74dfbdb06ee246147a304a \ + --hash=sha256:ed9749eef4cbd126da3dc1d6bcb3a57f5eb7ac6a6484146bdbf743f552dfc577 \ + --hash=sha256:ede83e07a75dd06bc501566c1eca2afc0d61677c1472ac9ad93fdee6e638a48d \ + --hash=sha256:ef4aea96ce4d3b074422cb4f2f64e216bf9e213004bb58ecfdf50ea02ea8eb9a \ + --hash=sha256:f3a3570c4a2a16746ac2c31a7c7c7b0c186b95ce902e33db6f28094ed7387dda \ + --hash=sha256:f407cb6b8e9d6d8c626bc73c945db1706035af8fd632295547bf1c9e46d092d6 \ + --hash=sha256:f74a575920ab21fe304421a3fc28793d82e299cae9eccb37084e9fc7f3617c20 + # via read-aconity-layers +packaging==26.2 \ + --hash=sha256:5fc45236b9446107ff2415ce77c807cee2862cb6fac22b8a73826d0693b0980e \ + --hash=sha256:ff452ff5a3e828ce110190feff1178bb1f2ea2281fa2075aadb987c2fb221661 + # via pytest +pluggy==1.6.0 \ + --hash=sha256:7dcc130b76258d33b90f61b658791dede3486c3e6bfb003ee5c9bfb396dd22f3 \ + --hash=sha256:e920276dd6813095e9377c0bc5566d94c932c33b27a3e3945d8389c374dd4746 + # via + # pytest + # pytest-cov +pygments==2.20.0 \ + --hash=sha256:6757cd03768053ff99f3039c1a36d6c0aa0b263438fcab17520b30a303a82b5f \ + --hash=sha256:81a9e26dd42fd28a23a2d169d86d7ac03b46e2f8b59ed4698fb4785f946d0176 + # via pytest +pytest==9.1.1 \ + --hash=sha256:1088fbde8f2b49d95a549a195707afa7a76a3ce9bcadc26b6d71f0ffda5fe313 \ + --hash=sha256:37a86b45efb9a47a61a36449063e8e18d0cab3161329fc099eb21783169c4f0c + # via pytest-cov +pytest-cov==7.1.0 \ + --hash=sha256:30674f2b5f6351aa09702a9c8c364f6a01c27aae0c1366ae8016160d1efc56b2 \ + --hash=sha256:a0461110b7865f9a271aa1b51e516c9a95de9d696734a2f71e3e78f46e1d4678 +ruff==0.15.18 \ + --hash=sha256:01a754cd6a1b630d3f97e33eb452cf7a98040482318e870f8bc52a5a30e62657 \ + --hash=sha256:02299e6e9fa5b297a3f6d5d10d7bcd655c925b028bb8b9d4588214549c6b9ec4 \ + --hash=sha256:08d4c86a68f2c3ec2c9d56380a71fb4a4f65373055cbb8caabd645e9102f38d4 \ + --hash=sha256:2186d9e940ae332ab293623a75b5f4fe49565f449954d50a72a046683aa6b809 \ + --hash=sha256:2330215f1f393fa8733f55edce04fcf94c36a2c460fcde31f78cc84e4951e9b1 \ + --hash=sha256:2698a964c70e8bf402dcb99c8810472d270d141e7aa8c4e13599fd52033a2f33 \ + --hash=sha256:37e5108745c2c0705da916d7d4de533ddf547051ef45f62888c31bae73f66318 \ + --hash=sha256:3fccc153a85417dcd976883160cacce486997b0a0058dd18f54b8aaaac7d1ce2 \ + --hash=sha256:56949a6ce8b3abde54c0bcb22cebfe57e8771cadc84b407ae8b8eaf67ebdcd43 \ + --hash=sha256:5a2c40a41a4cadbcf5897b548ab29dfe248b20c540961c0247d98a3973c70403 \ + --hash=sha256:5c2abf140438032bc77b2284a6c9944ecd8a19e5f1c7b52b1b8e4a0a80d19a7a \ + --hash=sha256:5f0480ce690cbb6c4db6e5d08f19fce98e10ba131a8b60c1bcdac42771e3ae2d \ + --hash=sha256:6ba7a07e03a44dbf10bb086ee06705b173625014ec99f73a7e6836a5e5590a0c \ + --hash=sha256:8b6850172348c8381b8b3084c5915a4393c2373b9b54cd5b5e1ea15812bc10df \ + --hash=sha256:a6aa6a3d979e48ae617578183674bf264fbe7d0114a796a26bd678d67963c7ff \ + --hash=sha256:a81beadbbff2c9c245561ae3f77b16709d87f35eec650d0501679239d3449b22 \ + --hash=sha256:b2c9257fcbd4a3e5b977a1904e6facca016bafe2edc17df24db67cfaee03b4e4 \ + --hash=sha256:dac80dc8d26b2257dbefabed62f5d255c3937b4ccb122da1fc634794fa3578b3 +tomli==2.4.1 ; python_full_version <= '3.11' \ + --hash=sha256:01f520d4f53ef97964a240a035ec2a869fe1a37dde002b57ebc4417a27ccd853 \ + --hash=sha256:0d85819802132122da43cb86656f8d1f8c6587d54ae7dcaf30e90533028b49fe \ + --hash=sha256:136443dbd7e1dee43c68ac2694fde36b2849865fa258d39bf822c10e8068eac5 \ + --hash=sha256:1d8591993e228b0c930c4bb0db464bdad97b3289fb981255d6c9a41aedc84b2d \ + --hash=sha256:2190f2e9dd7508d2a90ded5ed369255980a1bcdd58e52f7fe24b8162bf9fedbd \ + --hash=sha256:2c1c351919aca02858f740c6d33adea0c5deea37f9ecca1cc1ef9e884a619d26 \ + --hash=sha256:36d2bd2ad5fb9eaddba5226aa02c8ec3fa4f192631e347b3ed28186d43be6b54 \ + --hash=sha256:3d48a93ee1c9b79c04bb38772ee1b64dcf18ff43085896ea460ca8dec96f35f6 \ + --hash=sha256:47149d5bd38761ac8be13a84864bf0b7b70bc051806bc3669ab1cbc56216b23c \ + --hash=sha256:4ab97e64ccda8756376892c53a72bd1f964e519c77236368527f758fbc36a53a \ + --hash=sha256:4b605484e43cdc43f0954ddae319fb75f04cc10dd80d830540060ee7cd0243cd \ + --hash=sha256:504aa796fe0569bb43171066009ead363de03675276d2d121ac1a4572397870f \ + --hash=sha256:51529d40e3ca50046d7606fa99ce3956a617f9b36380da3b7f0dd3dd28e68cb5 \ + --hash=sha256:52c8ef851d9a240f11a88c003eacb03c31fc1c9c4ec64a99a0f922b93874fda9 \ + --hash=sha256:559db847dc486944896521f68d8190be1c9e719fced785720d2216fe7022b662 \ + --hash=sha256:5a881ab208c0baf688221f8cecc5401bd291d67e38a1ac884d6736cbcd8247e9 \ + --hash=sha256:5cb41aa38891e073ee49d55fbc7839cfdb2bc0e600add13874d048c94aadddd1 \ + --hash=sha256:5e262d41726bc187e69af7825504c933b6794dc3fbd5945e41a79bb14c31f585 \ + --hash=sha256:5ee18d9ebdb417e384b58fe414e8d6af9f4e7a0ae761519fb50f721de398dd4e \ + --hash=sha256:7008df2e7655c495dd12d2a4ad038ff878d4ca4b81fccaf82b714e07eae4402c \ + --hash=sha256:734e20b57ba95624ecf1841e72b53f6e186355e216e5412de414e3c51e5e3c41 \ + --hash=sha256:7c7e1a961a0b2f2472c1ac5b69affa0ae1132c39adcb67aba98568702b9cc23f \ + --hash=sha256:7f86fd587c4ed9dd76f318225e7d9b29cfc5a9d43de44e5754db8d1128487085 \ + --hash=sha256:7f94b27a62cfad8496c8d2513e1a222dd446f095fca8987fceef261225538a15 \ + --hash=sha256:88dceee75c2c63af144e456745e10101eb67361050196b0b6af5d717254dddf7 \ + --hash=sha256:8a650c2dbafa08d42e51ba0b62740dae4ecb9338eefa093aa5c78ceb546fcd5c \ + --hash=sha256:8d65a2fbf9d2f8352685bc1364177ee3923d6baf5e7f43ea4959d7d8bc326a36 \ + --hash=sha256:96481a5786729fd470164b47cdb3e0e58062a496f455ee41b4403be77cb5a076 \ + --hash=sha256:a120733b01c45e9a0c34aeef92bf0cf1d56cfe81ed9d47d562f9ed591a9828ac \ + --hash=sha256:b1d22e6e9387bf4739fbe23bfa80e93f6b0373a7f1b96c6227c32bef95a4d7a8 \ + --hash=sha256:b8c198f8c1805dc42708689ed6864951fd2494f924149d3e4bce7710f8eb5232 \ + --hash=sha256:c2541745709bad0264b7d4705ad453b76ccd191e64aa6f0fc66b69a293a45ece \ + --hash=sha256:c742f741d58a28940ce01d58f0ab2ea3ced8b12402f162f4d534dfe18ba1cd6a \ + --hash=sha256:c7f2c7f2b9ca6bdeef8f0fa897f8e05085923eb091721675170254cbc5b02897 \ + --hash=sha256:d312ef37c91508b0ab2cee7da26ec0b3ed2f03ce12bd87a588d771ae15dcf82d \ + --hash=sha256:d4d8fe59808a54658fcc0160ecfb1b30f9089906c50b23bcb4c69eddc19ec2b4 \ + --hash=sha256:da25dc3563bff5965356133435b757a795a17b17d01dbc0f42fb32447ddfd917 \ + --hash=sha256:eab21f45c7f66c13f2a9e0e1535309cee140182a9cdae1e041d02e47291e8396 \ + --hash=sha256:eb0dc4e38e6a1fd579e5d50369aa2e10acfc9cace504579b2faabb478e76941a \ + --hash=sha256:ec9bfaf3ad2df51ace80688143a6a4ebc09a248f6ff781a9945e51937008fcbc \ + --hash=sha256:ede3e6487c5ef5d28634ba3f31f989030ad6af71edfb0055cbbd14189ff240ba \ + --hash=sha256:f3c6818a1a86dd6dca7ddcaaf76947d5ba31aecc28cb1b67009a5877c9a64f3f \ + --hash=sha256:f758f1b9299d059cc3f6546ae2af89670cb1c4d48ea29c3cacc4fe7de3058257 \ + --hash=sha256:f8f0fc26ec2cc2b965b7a3b87cd19c5c6b8c5e5f436b984e85f486d652285c30 \ + --hash=sha256:fd0409a3653af6c147209d267a0e4243f0ae46b011aa978b1080359fddc9b6cf \ + --hash=sha256:ff18e6a727ee0ab0388507b89d1bc6a22b138d1e2fa56d1ad494586d61d2eae9 \ + --hash=sha256:ff2983983d34813c1aeb0fa89091e76c3a22889ee83ab27c5eeb45100560c049 + # via coverage +ty==0.0.51 \ + --hash=sha256:08adbe53fb8bc9e7f00e89bf1d3c875a02cda76d83f109d2e6ab1ff35a7bfa8c \ + --hash=sha256:25a5b31e6f23fd5dc63ad29087ded09932409e4154e2fe07bbaed015035990bb \ + --hash=sha256:2faed19a8f1505370de071c008df52a994fc03a204f3267c3a33a32ca26f854f \ + --hash=sha256:429a997394dac73870d71b87cc90efc54da3efaf319e72ca18aeef35a78aef90 \ + --hash=sha256:49a21237f6fd1de56beaff0a3e85fe022a09a3401e67e3abec41ce838a5d4d2e \ + --hash=sha256:608d417cd1eaf79bcbd713d9830d5e3db9d57ec225c3af3e4ac9a9ff66b45d70 \ + --hash=sha256:61b4b6a003c3ebe53a63a1125c9b6542aa01bc1b6c9a235d01ee328d000d61a9 \ + --hash=sha256:62ced5e380284f12b2dc4802a3e4ed3dac39913fc6719afde7978814a4c7f169 \ + --hash=sha256:62d94f06e8c317e89b6884f2bde443040e596b88c7c79bd944c84c105b06257a \ + --hash=sha256:79d1877e93460f936bc10ed1a31525702b7ce51075763ccba993be17f0b9e905 \ + --hash=sha256:947986bd82d324b3a5c58ce03f1dad160cdf36443d3e8f64b3484b861ba9bc64 \ + --hash=sha256:abd92913bc90d1705ef9391ff8c6822b61e2e827fa295eb30bf0dfabcf815645 \ + --hash=sha256:b90172d46365bb9d51a7011cbb5c60cc4f514f42c86635df6c092b717f85e1ac \ + --hash=sha256:bc7459348a253247bbfb2669a021e614281b86bbea24c36112b8a6e1a2499a16 \ + --hash=sha256:c1bd1355aee86af01e4e21b0bc16fc460fb05905761f0d8b8d70841de0feade8 \ + --hash=sha256:cc233a6235fb23e2a44b14731a10043e37ba2f30f2c361cf49ad3633c5b9da9c \ + --hash=sha256:dc5e93695ab5dcbf1eef663aee60ec23a413547cc9cb06adcb0d842e9166bd0f \ + --hash=sha256:f8f52952cff665bc52a36147e610c10f5699d30007d7a14ab7f345cff93476ff +win32-setctime==1.2.0 ; sys_platform == 'win32' \ + --hash=sha256:95d644c4e708aba81dc3704a116d8cbc974d70b3bdb8be1d150e36be6e9d1390 \ + --hash=sha256:ae1fdf948f5640aae05c511ade119313fb6a30d7eabe25fef9764dca5873c4c0 + # via loguru diff --git a/src/lib.rs b/src/lib.rs index e74c2a1..e46723f 100644 --- a/src/lib.rs +++ b/src/lib.rs @@ -2,7 +2,7 @@ use ndarray::{ArrayBase, Ix2, OwnedRepr}; use numpy::{PyArray2, ToPyArray}; use pyo3::exceptions; use pyo3::prelude::*; -use std::path::Path; +use std::path::PathBuf; pub mod rust_fn; @@ -60,10 +60,7 @@ fn read_selected_layers( _py: Python<'_>, file_list: Vec, ) -> PyResult>> { - let path_list = file_list - .iter() - .map(|x| Path::new(x).to_path_buf()) - .collect(); + let path_list = file_list.iter().map(PathBuf::from).collect(); let rs_result = rust_fn::read_selected_layers(path_list)?; let py_result = rs_result.to_pyarray(_py); Ok(py_result) diff --git a/src/rust_fn/mod.rs b/src/rust_fn/mod.rs index 8cb36e2..cf5d784 100644 --- a/src/rust_fn/mod.rs +++ b/src/rust_fn/mod.rs @@ -1,7 +1,7 @@ use csv::ReaderBuilder; use glob::glob; use indicatif::ProgressBar; -use ndarray::{concatenate, stack, Array1, Array2, ArrayView1, ArrayView2, Axis, Slice}; +use ndarray::{Array1, Array2, ArrayView1, ArrayView2, Axis, Slice, concatenate, stack}; use rayon::prelude::*; use std::fs::File; use std::path::{Path, PathBuf}; @@ -37,7 +37,7 @@ pub enum ReadError { pub type Result = std::result::Result; pub fn read_layers(folder: &str) -> Result> { - let glob_string: String = folder.to_owned() + "/*.pcd"; + let glob_string = format!("{}/*.pcd", folder); let mut glob_iterator = glob(glob_string.as_str())? .collect::, glob::GlobError>>()?; glob_iterator.par_sort_unstable_by(|a, b| { @@ -107,7 +107,7 @@ pub fn read_selected_layers(file_list: Vec) -> Result> { .zip(z_lens.par_iter_mut()) .try_for_each( |(((filepath, array_element), z_vals_element), z_lens_element)| -> Result<()> { - let (array, z, z_len) = read_file(filepath.to_path_buf())?; + let (array, z, z_len) = read_file(filepath.clone())?; *array_element = array; *z_vals_element = z; *z_lens_element = z_len; @@ -175,25 +175,32 @@ pub fn read_file(filepath: PathBuf) -> Result<(Array2, f64, usize)> { .delimiter(b' ') .has_headers(false) .from_reader(file); - let data = rdr - .records() - .collect::, _>>()? - .iter() - .map(|x| { - x.iter() - .map(|y| y.parse::().map_err(ReadError::ParseIntError)) - .collect::>>() - }) - .collect::>>()?; - let length = data.len(); - let width = data[0].len(); // WARNING: assumes fixed width columns! - let mut arr: Array2 = Array2::zeros((length, width)); - for (data_row, mut arr_row) in data.iter().zip(arr.axis_iter_mut(Axis(0))) { - for (data_i, arr_i) in data_row.iter().zip(arr_row.iter_mut()) { - *arr_i = *data_i as f64 + + let mut flat_data = Vec::new(); + let mut width = 0; + let mut length = 0; + + for result in rdr.records() { + let record = result?; + length += 1; + + if width == 0 { + width = record.len(); + } else if record.len() != width { + return Err(ReadError::MiscError(format!( + "Inconsistent row width: expected {}, found {}", + width, + record.len() + ))); + } + + for field in record.iter() { + flat_data.push(field.parse::()?); } } + let arr = Array2::from_shape_vec((length, width), flat_data)?; + Ok((arr, z, length)) } @@ -236,7 +243,7 @@ mod tests { }; use std::path::PathBuf; use tar::Archive; - use tempfile::{tempdir, TempDir}; + use tempfile::{TempDir, tempdir}; use xz::read::XzDecoder; const TEST_DATA_FILE: &str = "tests/correct.tar.xz"; @@ -354,7 +361,7 @@ mod tests { } } - if buffer.len() > 0 { + if !buffer.is_empty() { let flexbuf = Reader::get_root(buffer.as_slice())?; let ar: Array1 = Array1::deserialize(flexbuf)?; Ok(ar) @@ -382,12 +389,14 @@ mod tests { let true_x = unpack_test_data("correct_x_out.flex").unwrap(); let mut test_x = Array::range(-1000000., 1000000., 1.); test_x.par_map_inplace(rust_fn::correct_x); - assert!(true_x - .iter() - .zip(test_x.iter()) - .all(|(&x, y): (&f64, &f64)| -> bool { - x.ulps_eq(y, f64::default_epsilon(), f64::default_max_ulps()) - })); + assert!( + true_x + .iter() + .zip(test_x.iter()) + .all(|(&x, y): (&f64, &f64)| -> bool { + x.ulps_eq(y, f64::default_epsilon(), f64::default_max_ulps()) + }) + ); } #[test] @@ -405,11 +414,13 @@ mod tests { let true_y = unpack_test_data("correct_y_out.flex").unwrap(); let mut test_y = Array::range(-1000000., 1000000., 1.); test_y.par_map_inplace(rust_fn::correct_y); - assert!(true_y - .iter() - .zip(test_y.iter()) - .all(|(&x, y): (&f64, &f64)| -> bool { - x.ulps_eq(y, f64::default_epsilon(), f64::default_max_ulps()) - })); + assert!( + true_y + .iter() + .zip(test_y.iter()) + .all(|(&x, y): (&f64, &f64)| -> bool { + x.ulps_eq(y, f64::default_epsilon(), f64::default_max_ulps()) + }) + ); } } diff --git a/tests/read_layers_regr.npz b/tests/read_layers_regr.npz index 4741101..4302541 100644 Binary files a/tests/read_layers_regr.npz and b/tests/read_layers_regr.npz differ diff --git a/tests/test_read_layers.py b/tests/test_read_layers.py index c2cc751..0dab2d4 100644 --- a/tests/test_read_layers.py +++ b/tests/test_read_layers.py @@ -34,11 +34,11 @@ def write_layers_to_dir(dir_path): # Sorts arrays without mixing datapoints # This is needed because we dont need to guarantee read order def sort_result(ar): - ar = ar[ar[:, 4].argsort()] - ar = ar[ar[:, 3].argsort()] - ar = ar[ar[:, 0].argsort()] - ar = ar[ar[:, 1].argsort()] - ar = ar[ar[:, 2].argsort()] + ar = ar[ar[:, 4].argsort(kind='stable')] + ar = ar[ar[:, 3].argsort(kind='stable')] + ar = ar[ar[:, 0].argsort(kind='stable')] + ar = ar[ar[:, 1].argsort(kind='stable')] + ar = ar[ar[:, 2].argsort(kind='stable')] return ar diff --git a/uv.lock b/uv.lock new file mode 100644 index 0000000..78fcad0 --- /dev/null +++ b/uv.lock @@ -0,0 +1,1266 @@ +version = 1 +revision = 3 +requires-python = ">=3.11" +resolution-markers = [ + "python_full_version >= '3.12'", + "python_full_version < '3.12'", +] + +[[package]] +name = "accessible-pygments" +version = "0.0.5" +source = { registry = "https://pypi.org/simple" } +dependencies = [ + { name = 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