pip-deps(deps): bump the python-minor-patch group with 2 updates (#90)

Bumps the python-minor-patch group with 2 updates: [ruff](https://github.com/astral-sh/ruff) and [ty](https://github.com/astral-sh/ty).


Updates `ruff` from 0.16.0 to 0.16.1
- [Release notes](https://github.com/astral-sh/ruff/releases)
- [Changelog](https://github.com/astral-sh/ruff/blob/main/CHANGELOG.md)
- [Commits](https://github.com/astral-sh/ruff/compare/0.16.0...0.16.1)

Updates `ty` from 0.0.63 to 0.0.65
- [Release notes](https://github.com/astral-sh/ty/releases)
- [Changelog](https://github.com/astral-sh/ty/blob/main/CHANGELOG.md)
- [Commits](https://github.com/astral-sh/ty/compare/0.0.63...0.0.65)

---
updated-dependencies:
- dependency-name: ruff
  dependency-version: 0.16.1
  dependency-type: direct:production
  update-type: version-update:semver-patch
  dependency-group: python-minor-patch
- dependency-name: ty
  dependency-version: 0.0.65
  dependency-type: direct:production
  update-type: version-update:semver-patch
  dependency-group: python-minor-patch
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

.cargo/config.toml

@@ -0,0 +1,11 @@
+[target.x86_64-apple-darwin]
+rustflags = [
+  "-C", "link-arg=-undefined",
+  "-C", "link-arg=dynamic_lookup",
+]
+
+[target.aarch64-apple-darwin]
+rustflags = [
+  "-C", "link-arg=-undefined",
+  "-C", "link-arg=dynamic_lookup",
+]

.gitattributes

@@ -0,0 +1 @@
+*.npz filter=lfs diff=lfs merge=lfs -text

.github/CODEOWNERS

@@ -0,0 +1 @@
+* @Cian-H

.github/dependabot.yml

@@ -2,6 +2,18 @@ version: 2
 updates:
   - package-ecosystem: "cargo"
     directory: "/"
+    groups:
+      rust-major:
+        patterns:
+          - "*"
+        update-types:
+          - "major"
+      rust-minor-patch:
+        patterns:
+          - "*"
+        update-types:
+          - "minor"
+          - "patch"
     schedule:
       interval: "weekly"
       day: "monday"
@@ -9,8 +21,6 @@ updates:
     open-pull-requests-limit: 10
     allow:
       - dependency-type: "all"
-    reviewers:
-      - "Cian-H"
     assignees:
       - "Cian-H"
     commit-message:
@@ -19,6 +29,18 @@ updates:
 
   - package-ecosystem: "pip"
     directory: "/"
+    groups:
+      python-major:
+        patterns:
+          - "*"
+        update-types:
+          - "major"
+      python-minor-patch:
+        patterns:
+          - "*"
+        update-types:
+          - "minor"
+          - "patch"
     schedule:
       interval: "weekly"
       day: "monday"
@@ -26,8 +48,6 @@ updates:
     open-pull-requests-limit: 10
     allow:
       - dependency-type: "all"
-    reviewers:
-      - "Cian-H"
     assignees:
       - "Cian-H"
     commit-message:
@@ -36,6 +56,18 @@ updates:
       include: "scope"
 
   - package-ecosystem: "github-actions"
+    groups:
+      action-major:
+        patterns:
+          - "*"
+        update-types:
+          - "major"
+      action-minor-patch:
+        patterns:
+          - "*"
+        update-types:
+          - "minor"
+          - "patch"
     directory: "/"
     schedule:
       interval: "weekly"

.github/workflows/CI.yml

@@ -11,7 +11,7 @@ on:
       - main
       - master
     tags:
-      - '*'
+      - "*"
   pull_request:
   workflow_dispatch:
 
@@ -37,8 +37,8 @@ jobs:
           - runner: ubuntu-22.04
             target: ppc64le
     steps:
-      - uses: actions/checkout@v4
+      - uses: actions/checkout@v7
-      - uses: actions/setup-python@v5
+      - uses: actions/setup-python@v7
         with:
           python-version: 3.x
       - name: Build wheels
@@ -52,11 +52,11 @@ jobs:
         uses: PyO3/maturin-action@v1
         with:
           target: ${{ matrix.platform.target }}
-          args: --release --out dist -i python3.13t
+          args: --release --out dist -i python3.14t
           sccache: ${{ !startsWith(github.ref, 'refs/tags/') }}
           manylinux: auto
       - name: Upload wheels
-        uses: actions/upload-artifact@v4
+        uses: actions/upload-artifact@v7
         with:
           name: wheels-linux-${{ matrix.platform.target }}
           path: dist
@@ -75,8 +75,8 @@ jobs:
           - runner: ubuntu-22.04
             target: armv7
     steps:
-      - uses: actions/checkout@v4
+      - uses: actions/checkout@v7
-      - uses: actions/setup-python@v5
+      - uses: actions/setup-python@v7
         with:
           python-version: 3.x
       - name: Build wheels
@@ -90,11 +90,11 @@ jobs:
         uses: PyO3/maturin-action@v1
         with:
           target: ${{ matrix.platform.target }}
-          args: --release --out dist -i python3.13t
+          args: --release --out dist -i python3.14t
           sccache: ${{ !startsWith(github.ref, 'refs/tags/') }}
           manylinux: musllinux_1_2
       - name: Upload wheels
-        uses: actions/upload-artifact@v4
+        uses: actions/upload-artifact@v7
         with:
           name: wheels-musllinux-${{ matrix.platform.target }}
           path: dist
@@ -109,8 +109,8 @@ jobs:
           - runner: windows-latest
             target: x86
     steps:
-      - uses: actions/checkout@v4
+      - uses: actions/checkout@v7
-      - uses: actions/setup-python@v5
+      - uses: actions/setup-python@v7
         with:
           python-version: 3.x
           architecture: ${{ matrix.platform.target }}
@@ -125,10 +125,10 @@ jobs:
       #   uses: PyO3/maturin-action@v1
       #   with:
       #     target: ${{ matrix.platform.target }}
-      #     args: --release --out dist -i python3.13t
+      #     args: --release --out dist -i python3.14t
       #     sccache: ${{ !startsWith(github.ref, 'refs/tags/') }}
       - name: Upload wheels
-        uses: actions/upload-artifact@v4
+        uses: actions/upload-artifact@v7
         with:
           name: wheels-windows-${{ matrix.platform.target }}
           path: dist
@@ -138,13 +138,15 @@ jobs:
     strategy:
       matrix:
         platform:
-          - runner: macos-13
-            target: x86_64
           - runner: macos-14
             target: aarch64
+          - runner: macos-15
+            target: aarch64
+          - runner: macos-15-intel
+            target: aarch64
     steps:
-      - uses: actions/checkout@v4
+      - uses: actions/checkout@v7
-      - uses: actions/setup-python@v5
+      - uses: actions/setup-python@v7
         with:
           python-version: 3.x
       - name: Build wheels
@@ -157,10 +159,10 @@ jobs:
         uses: PyO3/maturin-action@v1
         with:
           target: ${{ matrix.platform.target }}
-          args: --release --out dist -i python3.13t
+          args: --release --out dist -i python3.14t
           sccache: ${{ !startsWith(github.ref, 'refs/tags/') }}
       - name: Upload wheels
-        uses: actions/upload-artifact@v4
+        uses: actions/upload-artifact@v7
         with:
           name: wheels-macos-${{ matrix.platform.target }}
           path: dist
@@ -168,14 +170,14 @@ jobs:
   sdist:
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v4
+      - uses: actions/checkout@v7
       - name: Build sdist
         uses: PyO3/maturin-action@v1
         with:
           command: sdist
           args: --out dist
       - name: Upload sdist
-        uses: actions/upload-artifact@v4
+        uses: actions/upload-artifact@v7
         with:
           name: wheels-sdist
           path: dist
@@ -193,11 +195,11 @@ jobs:
       # Used to generate artifact attestation
       attestations: write
     steps:
-      - uses: actions/download-artifact@v4
+      - uses: actions/download-artifact@v8
       - name: Generate artifact attestation
-        uses: actions/attest-build-provenance@v2
+        uses: actions/attest-build-provenance@v4
         with:
-          subject-path: 'wheels-*/*'
+          subject-path: "wheels-*/*"
       - name: Publish to PyPI
         if: ${{ startsWith(github.ref, 'refs/tags/') }}
         uses: PyO3/maturin-action@v1
@@ -206,3 +208,9 @@ jobs:
         with:
           command: upload
           args: --non-interactive --skip-existing wheels-*/*
+      - name: Create GitHub Release
+        if: ${{ startsWith(github.ref, 'refs/tags/') }}
+        uses: softprops/action-gh-release@v3
+        with:
+          files: wheels-*/*
+          generate_release_notes: true

.github/workflows/python.yaml

@@ -9,44 +9,40 @@ on:
 jobs:
   build-python:
 
-    name: Build python package for ${{ matrix.os }} with Python ${{ matrix.python-version }} via Poetry ${{ matrix.poetry-version }}
+    name: Build python package for ${{ matrix.os }} with Python ${{ matrix.python-version }} via uv
     runs-on: ${{ matrix.os }}
     timeout-minutes: 30
     strategy:
       fail-fast: false
       matrix:
-        python-version: ["3.11", "3.12", "3.13"]
+        python-version: ["3.11", "3.12", "3.13", "3.14"]
-        os: [ubuntu-latest, windows-latest]
+        os: [ubuntu-latest, windows-latest, macos-latest]
-        poetry-version: ["latest"]
 
     steps:
-    - uses: actions/checkout@v4
+    - uses: actions/checkout@v7
     - name: Set up Python ${{ matrix.python-version }}
-      uses: actions/setup-python@v5
+      uses: actions/setup-python@v7
       with:
         python-version: ${{ matrix.python-version }}
+    - name: Set up uv
+      uses: astral-sh/setup-uv@v7
+      with:
+        enable-cache: true
     - name: Install Act dependencies
       if: ${{ env.ACT }}
       run: |
         apt-get update && apt-get install sudo -y cargo
-    - name: Run poetry image
-      uses: abatilo/actions-poetry@v4
-      with:
-        poetry-version: ${{ matrix.poetry-version }}
-    - name: Ensure lockfile is updated
-      run: |
-        poetry lock
     - name: Install python dependencies
       run: |
-        poetry install
+        uv sync --group dev
     - name: Build rust package
       run: |
-        poetry run maturin develop
+        uv run maturin develop
     - name: Test with pytest
       env:
         PYTEST_ADDOPTS: "--cov read_aconity_layers --cov-report=lcov"
       run: |
-        poetry run pytest
+        uv run pytest
 
     - name: Upload coverage to Coveralls
       uses: coverallsapp/github-action@master

.github/workflows/rust.yaml

@@ -17,14 +17,14 @@ jobs:
     timeout-minutes: 30
     strategy:
       matrix:
-        os: [ubuntu-latest, windows-latest]
+        os: [ubuntu-latest, windows-latest, macos-latest]
 
     steps:
-    - uses: actions/checkout@v4
+    - uses: actions/checkout@v7
     - name: Set up Python
-      uses: actions/setup-python@v5
+      uses: actions/setup-python@v7
       with:
-        python-version: "3.12"
+        python-version: "3.14"
     - name: Install Act dependencies
       if: ${{ env.ACT }}
       run: |

.github/workflows/tagging.yml

@@ -6,6 +6,7 @@ on:
       - main
 
 permissions:
+  actions: write
   contents: write
 
 jobs:
@@ -13,7 +14,7 @@ jobs:
     runs-on: ubuntu-latest
     steps:
       - name: Checkout Repository
-        uses: actions/checkout@v4
+        uses: actions/checkout@v7
         with:
           fetch-depth: 0
 
@@ -32,13 +33,26 @@ jobs:
             echo "TAG_EXISTS=true" >> $GITHUB_ENV
           else
             echo "TAG_EXISTS=false" >> $GITHUB_ENV
+            echo "VERSION=$VERSION" >> $GITHUB_ENV
           fi
 
       - name: Create and Push Git Tag
         if: env.TAG_EXISTS == 'false'
         run: |
-          VERSION=${{ fromJson(steps.info.outputs.object).package.version }}
           git config --global user.name "github-actions[bot]"
           git config --global user.email "github-actions[bot]@users.noreply.github.com"
-          git tag "$VERSION"
+          git tag "${{ env.VERSION }}"
-          git push origin "$VERSION"
+          git push origin "${{ env.VERSION }}"
+
+      - name: Trigger Release Workflow
+        if: env.TAG_EXISTS == 'false'
+        uses: actions/github-script@v9
+        with:
+          github-token: ${{ secrets.GITHUB_TOKEN }}
+          script: |
+            github.rest.actions.createWorkflowDispatch({
+              owner: context.repo.owner,
+              repo: context.repo.repo,
+              workflow_id: 'CI.yml',
+              ref: '${{ env.VERSION }}'  // <-- This is the key change!
+            })

.gitignore

@@ -5,7 +5,7 @@ target/
 
 # Remove Cargo.lock from gitignore if creating an executable, leave it for libraries
 # More information here https://doc.rust-lang.org/cargo/guide/cargo-toml-vs-cargo-lock.html
-Cargo.lock
+# Cargo.lock
 
 # These are backup files generated by rustfmt
 **/*.rs.bk
@@ -85,6 +85,7 @@ instance/
 # Sphinx documentation
 docs/rust/crates
 docs/_build/
+docs/.cargo/
 
 # PyBuilder
 .pybuilder/

.pre-commit-config.yaml

@@ -1,40 +1,30 @@
 default_language_version:
-  python: python3.12
+  python: python3.13
 
 repos:
-  - repo: https://github.com/astral-sh/ruff-pre-commit
-    rev: v0.11.11
-    hooks:
-      - id: ruff
-        types: [python]
-        exclude: docs/
-      - id: ruff-format
-        types: [python]
-
-  - repo: https://github.com/pre-commit/mirrors-mypy
-    rev: v1.10.0
-    hooks:
-      - id: mypy
-        types: [python]
-        exclude: docs/
-
   - repo: https://github.com/doublify/pre-commit-rust
     rev: v1.0
     hooks:
       - id: fmt
       - id: cargo-check
 
-  - repo: https://github.com/python-poetry/poetry
+  - repo: https://github.com/astral-sh/uv-pre-commit
-    rev: "1.8.0"
+    rev: 0.11.22
     hooks:
-    - id: poetry-check
+      - id: uv-lock
-    - id: poetry-install
+      - id: uv-export
-    - id: poetry-lock
+
-    - id: poetry-export
+  - repo: https://github.com/astral-sh/ruff-pre-commit
-      args: ["-f", "requirements.txt", "-o", "./requirements.txt"]
+    rev: v0.15.18
-    - id: poetry-export
+    hooks:
-      name: poetry-export-docs
+      - id: ruff-check
-      args: ["-f", "requirements.txt", "--with", "docs", "-o", "./docs/requirements.txt"]
+        exclude: docs/
+      - id: ruff-format
+
+  - repo: https://github.com/astral-sh/ty-pre-commit
+    rev: v0.0.51
+    hooks:
+      - id: ty
 
   - repo: local
     hooks:
@@ -43,7 +33,7 @@ repos:
         entry: |
           bash -c 'cat docs/readme_top.rst docs/readme_bottom.rst > README.rst'
         language: system
-      files: 'docs/readme*.rst'
+        files: "docs/readme*.rst"
 
   - repo: local
     hooks:

.python-version

@@ -0,0 +1 @@
+3.14

.readthedocs.yaml

@@ -4,14 +4,16 @@ build:
   os: ubuntu-24.04
   tools:
     python: "3.13"
+    rust: "1.86"
   jobs:
-    pre_install:
+    pre_create_environment:
-      - curl --proto '=https' --tlsv1.2 -sSf https://sh.rustup.rs | sh -s -- -y
+      - asdf plugin add uv
-      - source ~/.cargo/env
+      - asdf install uv latest
-
+      - asdf global uv latest
-sphinx:
+      - asdf plugin add just
-   configuration: docs/conf.py
+      - asdf install just latest
-
+      - asdf global just latest
-python:
+    create_environment:
+      - uv sync --group dev --group docs
     install:
-   - requirements: docs/requirements.txt
+      - PATH="$PATH:$HOME/.asdf/installs/rust/1.86.0/bin" just docs html_out $READTHEDOCS_OUTPUT

Cargo.lock

@@ -0,0 +1,907 @@
+# This file is automatically @generated by Cargo.
+# It is not intended for manual editing.
+version = 4
+
+[[package]]
+name = "anyhow"
+version = "1.0.104"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "330a5ed07fa54e4702c9d6c4174f74427fc0ef6e214bbd677ae50a5099946470"
+
+[[package]]
+name = "approx"
+version = "0.5.1"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "cab112f0a86d568ea0e627cc1d6be74a1e9cd55214684db5561995f6dad897c6"
+dependencies = [
+ "num-traits",
+]
+
+[[package]]
+name = "arbitrary"
+version = "1.4.2"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "c3d036a3c4ab069c7b410a2ce876bd74808d2d0888a82667669f8e783a898bf1"
+dependencies = [
+ "derive_arbitrary",
+]
+
+[[package]]
+name = "arbtest"
+version = "0.3.2"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "2a3be567977128c0f71ad1462d9624ccda712193d124e944252f0c5789a06d46"
+dependencies = [
+ "arbitrary",
+]
+
+[[package]]
+name = "autocfg"
+version = "1.5.1"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "f2032f911046de80f0a198e0901378627c33f59ea0ac00e363d481118bd70a53"
+
+[[package]]
+name = "bitflags"
+version = "1.3.2"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "bef38d45163c2f1dde094a7dfd33ccf595c92905c8f8f4fdc18d06fb1037718a"
+
+[[package]]
+name = "bitflags"
+version = "2.13.1"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "b588b76d00fde79687d7646a9b5bdf3cc0f655e0bbd080335a95d7e96f3587da"
+
+[[package]]
+name = "bumpalo"
+version = "3.20.3"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "72f5acc6cb2ba439de613abc23857ec3d78374d8ed5ac84e9d11336e87da8649"
+
+[[package]]
+name = "byteorder"
+version = "1.5.0"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "1fd0f2584146f6f2ef48085050886acf353beff7305ebd1ae69500e27c67f64b"
+
+[[package]]
+name = "cc"
+version = "1.4.0"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "5add81bb678e6cb321aff7fa0dc7689ad82b112dbc032cea19f91d6b8e3582b9"
+dependencies = [
+ "find-msvc-tools",
+ "shlex",
+]
+
+[[package]]
+name = "cfg-if"
+version = "1.0.4"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "9330f8b2ff13f34540b44e946ef35111825727b38d33286ef986142615121801"
+
+[[package]]
+name = "console"
+version = "0.16.4"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "4fe5f465a4f6fee88fad41b85d990f84c835335e85b5d9e6e63e0d06d28cba7c"
+dependencies = [
+ "encode_unicode",
+ "libc",
+ "unicode-width",
+ "windows-sys",
+]
+
+[[package]]
+name = "crossbeam-deque"
+version = "0.8.7"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "5181e0de7b61eb03a81e347d6dd8797bae9da5146707b51077e2d71a54ec0ceb"
+dependencies = [
+ "crossbeam-epoch",
+ "crossbeam-utils",
+]
+
+[[package]]
+name = "crossbeam-epoch"
+version = "0.9.20"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "2d6914041f254d6e9176c01941b21115dcfb7089e55135a35411081bd106ef3f"
+dependencies = [
+ "crossbeam-utils",
+]
+
+[[package]]
+name = "crossbeam-utils"
+version = "0.8.22"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "61803da095bee82a81bb1a452ecc25d3b2f1416d1897eb86430c6159ef717c17"
+
+[[package]]
+name = "csv"
+version = "1.4.0"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "52cd9d68cf7efc6ddfaaee42e7288d3a99d613d4b50f76ce9827ae0c6e14f938"
+dependencies = [
+ "csv-core",
+ "itoa",
+ "ryu",
+ "serde_core",
+]
+
+[[package]]
+name = "csv-core"
+version = "0.1.13"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "704a3c26996a80471189265814dbc2c257598b96b8a7feae2d31ace646bb9782"
+dependencies = [
+ "memchr",
+]
+
+[[package]]
+name = "derive_arbitrary"
+version = "1.4.2"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "1e567bd82dcff979e4b03460c307b3cdc9e96fde3d73bed1496d2bc75d9dd62a"
+dependencies = [
+ "proc-macro2",
+ "quote",
+ "syn 2.0.119",
+]
+
+[[package]]
+name = "either"
+version = "1.17.0"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "9e5e8f6c15a24b9a3ee5efec809ccd006d3b30e8b3bb63c39af737c7f87daa1d"
+
+[[package]]
+name = "encode_unicode"
+version = "1.0.0"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "34aa73646ffb006b8f5147f3dc182bd4bcb190227ce861fc4a4844bf8e3cb2c0"
+
+[[package]]
+name = "equivalent"
+version = "1.0.2"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "877a4ace8713b0bcf2a4e7eec82529c029f1d0619886d18145fea96c3ffe5c0f"
+
+[[package]]
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+ "indexmap",
+ "toml_datetime",
+ "winnow",
+]
+
+[[package]]
+name = "unicode-ident"
+version = "1.0.24"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "e6e4313cd5fcd3dad5cafa179702e2b244f760991f45397d14d4ebf38247da75"
+
+[[package]]
+name = "unicode-width"
+version = "0.2.2"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "b4ac048d71ede7ee76d585517add45da530660ef4390e49b098733c6e897f254"
+
+[[package]]
+name = "unit-prefix"
+version = "0.5.2"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "81e544489bf3d8ef66c953931f56617f423cd4b5494be343d9b9d3dda037b9a3"
+
+[[package]]
+name = "wasm-bindgen"
+version = "0.2.125"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "8ddb3f79143bced6de84270411622a2699cee572fc0875aeaf1e7867cf9fca1a"
+dependencies = [
+ "cfg-if",
+ "once_cell",
+ "rustversion",
+ "wasm-bindgen-macro",
+ "wasm-bindgen-shared",
+]
+
+[[package]]
+name = "wasm-bindgen-macro"
+version = "0.2.125"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "4e21a184b13fb19e157296e2c46056aec9092264fab83e4ba59e68c61b323c3d"
+dependencies = [
+ "quote",
+ "wasm-bindgen-macro-support",
+]
+
+[[package]]
+name = "wasm-bindgen-macro-support"
+version = "0.2.125"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "fecefd9c35bd935a20fc3fc344b5f29138961e4f47fb03297d88f2587afb5ebd"
+dependencies = [
+ "bumpalo",
+ "proc-macro2",
+ "quote",
+ "syn 2.0.119",
+ "wasm-bindgen-shared",
+]
+
+[[package]]
+name = "wasm-bindgen-shared"
+version = "0.2.125"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "23939e44bb9a5d7576fa2b563dc2e136628f1224e88a8deed09e04858b77871f"
+dependencies = [
+ "unicode-ident",
+]
+
+[[package]]
+name = "web-time"
+version = "1.1.0"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "5a6580f308b1fad9207618087a65c04e7a10bc77e02c8e84e9b00dd4b12fa0bb"
+dependencies = [
+ "js-sys",
+ "wasm-bindgen",
+]
+
+[[package]]
+name = "windows-link"
+version = "0.2.1"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "f0805222e57f7521d6a62e36fa9163bc891acd422f971defe97d64e70d0a4fe5"
+
+[[package]]
+name = "windows-sys"
+version = "0.61.2"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "ae137229bcbd6cdf0f7b80a31df61766145077ddf49416a728b02cb3921ff3fc"
+dependencies = [
+ "windows-link",
+]
+
+[[package]]
+name = "winnow"
+version = "0.5.40"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "f593a95398737aeed53e489c785df13f3618e41dbcd6718c6addbf1395aa6876"
+dependencies = [
+ "memchr",
+]
+
+[[package]]
+name = "xattr"
+version = "1.6.1"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "32e45ad4206f6d2479085147f02bc2ef834ac85886624a23575ae137c8aa8156"
+dependencies = [
+ "libc",
+ "rustix",
+]
+
+[[package]]
+name = "xz"
+version = "0.1.0"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "3c887690ff2a2e233e8e49633461521f98ec57fbff9d59a884c9a4f04ec1da34"
+dependencies = [
+ "xz2",
+]
+
+[[package]]
+name = "xz2"
+version = "0.1.7"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "388c44dc09d76f1536602ead6d325eb532f5c122f17782bd57fb47baeeb767e2"
+dependencies = [
+ "lzma-sys",
+]

Cargo.toml

@@ -1,7 +1,7 @@
 [package]
 name = "read_aconity_layers"
-version = "0.4.4"
+version = "0.5.0"
-edition = "2021"
+edition = "2024"
 
 [lib]
 name = "read_aconity_layers"
@@ -9,13 +9,13 @@ path = "src/lib.rs"
 crate-type = ["cdylib"]
 
 [dependencies]
-csv = "*"
+csv = "1.3.0"
-glob = "*"
+glob = "0.3.2"
-indicatif = "*"
+indicatif = "0.18.0"
-ndarray = { version = "0.16.1", features = ["rayon"] }
+ndarray = { version = "0.17.2", features = ["rayon"] }
-numpy = "0.25.0"
+numpy = "0.29.0"
-pyo3 = { version = "0.25.0", features = ["abi3-py311", "extension-module"] }
+pyo3 = { version = "0.29.0", features = ["abi3-py311", "extension-module"] }
-rayon = "*"
+rayon = "1.10.0"
 thiserror = "2.0.12"
 
 [dev-dependencies]
@@ -25,9 +25,8 @@ arbitrary = { version = "1.3.2", features = ["derive"] }
 arbtest = "0.3.1"
 flexbuffers = "25.2.10"
 float-cmp = "0.10.0"
-ndarray = { version = "0.16.1", features = ["rayon", "serde"] }
+ndarray = { version = "0.17.2", features = ["rayon", "serde"] }
 serde = "1.0.200"
-sphinx-rustdocgen = "0.8.1"
 tar = "0.4.40"
 tempfile = "3.10.1"
 xz = "0.1.0"

README.md

@@ -1 +0,0 @@
-A utility for fast reading of layer data from the aconity mini powder bed fusion machine

README.rst

@@ -1,5 +1,6 @@
-read_aconity_layers
+#####################
-==================================
+ read_aconity_layers
+#####################
 
 .. image:: https://github.com/Cian-H/read_aconity_layers/workflows/CI/badge.svg
   :target: https://github.com/Cian-H/read_aconity_layers/actions/workflows/CI.yml
@@ -22,33 +23,42 @@ read_aconity_layers
 .. image:: https://readthedocs.org/projects/read-aconity-layers/badge/?version=latest
   :target: https://read-aconity-layers.readthedocs.io/en/latest/?badge=latest
 
-.. image:: https://coveralls.io/repos/github/Cian-H/read-aconity-layers/badge.svg?branch=main
+.. image:: https://coveralls.io/repos/github/Cian-H/read_aconity_layers/badge.svg?branch=main
-        :target: https://coveralls.io/github/Cian-H/read-aconity-layers?branch=main
+  :target: https://coveralls.io/github/Cian-H/read_aconity_layers?branch=main
+
 
 .. image:: https://img.shields.io/badge/code%20style-Ruff-D7FF64.svg
   :target: https://github.com/astral-sh/ruff
 
-==================================
+----
 
-A library for fast reading of layer data from the aconity mini powder bed fusion machine.
+A library for fast reading of layer data from the aconity mini powder
+bed fusion machine.
 
-Overview
+##########
---------
+ Overview
+##########
 
-``read_aconity_layers`` is a high-performance Python library for reading and processing layer data from Aconity mini powder bed fusion machines. It's built with Rust for maximum performance and uses PyO3 for seamless Python integration.
+``read_aconity_layers`` is a high-performance Python library for reading
+and processing layer data from Aconity mini powder bed fusion machines.
+It's built with Rust for maximum performance and uses PyO3 for seamless
+Python integration.
 
-Features
+##########
---------
+ Features
+##########
 
-* **Fast**: Built with Rust for high-performance data processing
+-  **Fast**: Built with Rust for high-performance data processing
-* **Simple**: Easy-to-use Python API
+-  **Simple**: Easy-to-use Python API
-* **Parallel**: Leverages Rayon for parallel processing of multiple files
+-  **Parallel**: Leverages Rayon for parallel processing of multiple
-* **Type-safe**: Full type annotations and stub files included
+   files
+-  **Type-safe**: Full type annotations and stub files included
 
-Quick Example
+###############
--------------
+ Quick Example
+###############
 
-.. code-block:: python
+.. code:: python
 
    import read_aconity_layers as ral
    import numpy as np
@@ -62,4 +72,3 @@ Quick Example
 
    # Read a single layer
    layer = ral.read_layer("/path/to/0.01.pcd")
-

devenv.lock

@@ -3,10 +3,11 @@
     "devenv": {
       "locked": {
         "dir": "src/modules",
-        "lastModified": 1748361913,
+        "lastModified": 1781800860,
+        "narHash": "sha256-LrEo0eC5ckMvjpBRCuk5q5/vjItKlxnb4n/clHNRZlk=",
         "owner": "cachix",
         "repo": "devenv",
-        "rev": "b510085f1ca92779782d1e3de631b2292a30edb2",
+        "rev": "d59d872d80876d9eeb3e214d3b088bc4a14a9c4f",
         "type": "github"
       },
       "original": {
@@ -19,14 +20,15 @@
     "flake-compat": {
       "flake": false,
       "locked": {
-        "lastModified": 1747046372,
+        "lastModified": 1767039857,
-        "owner": "edolstra",
+        "narHash": "sha256-vNpUSpF5Nuw8xvDLj2KCwwksIbjua2LZCqhV1LNRDns=",
+        "owner": "NixOS",
         "repo": "flake-compat",
-        "rev": "9100a0f413b0c601e0533d1d94ffd501ce2e7885",
+        "rev": "5edf11c44bc78a0d334f6334cdaf7d60d732daab",
         "type": "github"
       },
       "original": {
-        "owner": "edolstra",
+        "owner": "NixOS",
         "repo": "flake-compat",
         "type": "github"
       }
@@ -34,10 +36,11 @@
     "flake-compat_2": {
       "flake": false,
       "locked": {
-        "lastModified": 1747046372,
+        "lastModified": 1767039857,
+        "narHash": "sha256-vNpUSpF5Nuw8xvDLj2KCwwksIbjua2LZCqhV1LNRDns=",
         "owner": "edolstra",
         "repo": "flake-compat",
-        "rev": "9100a0f413b0c601e0533d1d94ffd501ce2e7885",
+        "rev": "5edf11c44bc78a0d334f6334cdaf7d60d732daab",
         "type": "github"
       },
       "original": {
@@ -50,15 +53,14 @@
       "inputs": {
         "flake-compat": "flake-compat",
         "gitignore": "gitignore",
-        "nixpkgs": [
+        "nixpkgs": "nixpkgs"
-          "nixpkgs"
-        ]
       },
       "locked": {
-        "lastModified": 1747372754,
+        "lastModified": 1781733627,
+        "narHash": "sha256-U3yTuGBnmXvXoQI3qkpfEDsn9RovQPAjN7ndRco+3u0=",
         "owner": "cachix",
         "repo": "git-hooks.nix",
-        "rev": "80479b6ec16fefd9c1db3ea13aeb038c60530f46",
+        "rev": "3bbec39bc90eadfa031e6f3b77272f3f60803e39",
         "type": "github"
       },
       "original": {
@@ -76,6 +78,7 @@
       },
       "locked": {
         "lastModified": 1709087332,
+        "narHash": "sha256-HG2cCnktfHsKV0s4XW83gU3F57gaTljL9KNSuG6bnQs=",
         "owner": "hercules-ci",
         "repo": "gitignore.nix",
         "rev": "637db329424fd7e46cf4185293b9cc8c88c95394",
@@ -89,16 +92,17 @@
     },
     "nixpkgs": {
       "locked": {
-        "lastModified": 1746807397,
+        "lastModified": 1770073757,
-        "owner": "cachix",
+        "narHash": "sha256-Vy+G+F+3E/Tl+GMNgiHl9Pah2DgShmIUBJXmbiQPHbI=",
-        "repo": "devenv-nixpkgs",
+        "owner": "NixOS",
-        "rev": "c5208b594838ea8e6cca5997fbf784b7cca1ca90",
+        "repo": "nixpkgs",
+        "rev": "47472570b1e607482890801aeaf29bfb749884f6",
         "type": "github"
       },
       "original": {
-        "owner": "cachix",
+        "owner": "NixOS",
-        "ref": "rolling",
+        "ref": "nixpkgs-unstable",
-        "repo": "devenv-nixpkgs",
+        "repo": "nixpkgs",
         "type": "github"
       }
     },
@@ -110,10 +114,11 @@
         ]
       },
       "locked": {
-        "lastModified": 1746223523,
+        "lastModified": 1781070343,
+        "narHash": "sha256-wXAybU+2LlbXm9cfRDHRPASakq60rLvZBXVT2Ahkj1U=",
         "owner": "cachix",
         "repo": "nixpkgs-python",
-        "rev": "3f5f1dbe0122a1741907aa5ab76f7337ffcd2ccb",
+        "rev": "23629493653be6df0472a46b1be1d65cbd6df55b",
         "type": "github"
       },
       "original": {
@@ -122,15 +127,48 @@
         "type": "github"
       }
     },
+    "nixpkgs-src": {
+      "flake": false,
+      "locked": {
+        "lastModified": 1781454065,
+        "narHash": "sha256-d2xfDjnfRuf/xYGdu9VVRHiav/2w5hDL/5cw2TuVAXw=",
+        "owner": "NixOS",
+        "repo": "nixpkgs",
+        "rev": "9eac87a12312b8f60dd52e1c6e1a265f6fc7f5fc",
+        "type": "github"
+      },
+      "original": {
+        "owner": "NixOS",
+        "ref": "nixpkgs-unstable",
+        "repo": "nixpkgs",
+        "type": "github"
+      }
+    },
+    "nixpkgs_2": {
+      "inputs": {
+        "nixpkgs-src": "nixpkgs-src"
+      },
+      "locked": {
+        "lastModified": 1781620901,
+        "narHash": "sha256-UF6scQlG+6lRkZBUpn/3KNavhOo5G8kDWhjVHcno8uc=",
+        "owner": "cachix",
+        "repo": "devenv-nixpkgs",
+        "rev": "2df109b343d3c68efd752e32a444a1d9b9f89afa",
+        "type": "github"
+      },
+      "original": {
+        "owner": "cachix",
+        "ref": "rolling",
+        "repo": "devenv-nixpkgs",
+        "type": "github"
+      }
+    },
     "root": {
       "inputs": {
         "devenv": "devenv",
         "git-hooks": "git-hooks",
-        "nixpkgs": "nixpkgs",
+        "nixpkgs": "nixpkgs_2",
-        "nixpkgs-python": "nixpkgs-python",
+        "nixpkgs-python": "nixpkgs-python"
-        "pre-commit-hooks": [
-          "git-hooks"
-        ]
       }
     }
   },

devenv.nix

@@ -9,20 +9,28 @@
     act
     cargo-bump
     git
+    git-lfs
+    pre-commit
     ruff
   ];
 
   env.NIX_LD_LIBRARY_PATH = lib.makeLibraryPath (with pkgs; [
     stdenv.cc.cc
+    zlib
   ]);
   env.NIX_LD = lib.fileContents "${pkgs.stdenv.cc}/nix-support/dynamic-linker";
 
+  enterShell = ''
+    unset PYTHONPATH
+  '';
+
   languages = {
     python = {
-      version = "3.13";
+      version = "3.14";
       enable = true;
-      poetry = {
+      uv = {
         enable = true;
+        sync.enable = true;
       };
     };
   };

devenv.yaml

@@ -7,5 +7,7 @@ inputs:
     inputs:
       nixpkgs:
         follows: nixpkgs
+  git-hooks:
+    url: github:cachix/git-hooks.nix
 
 impure: true

docs/conf.py

@@ -9,7 +9,10 @@ def get_release() -> str:
     import subprocess
     pkgid = subprocess.run(["cargo", "pkgid"], capture_output=True).stdout.decode().strip()
     release_start = pkgid.rfind("#") + 1
-    return pkgid[release_start:]
+    pkglabel = pkgid[release_start:]
+    verlabel = pkglabel[pkglabel.rfind("@") + 1:] if "@" in pkglabel else pkglabel
+    return verlabel
+
 
 project = "RAL"
 copyright = "2024, Cian Hughes"

docs/development.rst

@@ -14,7 +14,7 @@ Prerequisites
 
 -  Rust 1.70+ with Cargo
 -  Python 3.11+
--  Poetry
+-  uv
 -  Git
 
 Environment Setup
@@ -31,19 +31,19 @@ Environment Setup
 
    .. code:: bash
 
-      poetry install --with dev,docs
+      uv sync --group dev --group docs
 
 #. **Setup pre-commit hooks:**
 
    .. code:: bash
 
-      poetry run pre-commit install
+      uv run pre-commit install
 
 #. **Build the Rust extension:**
 
    .. code:: bash
 
-      poetry run maturin develop
+      uv run maturin develop
 
 ************************
  Code Style and Quality
@@ -55,7 +55,7 @@ Python Code
 ===========
 
 -  **Ruff**: For linting and formatting
--  **MyPy**: For type checking
+-  **ty**: For type checking
 -  **Pytest**: For testing
 
 Run quality checks:
@@ -63,14 +63,14 @@ Run quality checks:
 .. code:: bash
 
    # Format and lint Python code
-   poetry run ruff format .
+   uv run ruff format .
-   poetry run ruff check .
+   uv run ruff check .
 
    # Type checking
-   poetry run mypy .
+   uv run ty check
 
    # Run tests
-   poetry run pytest
+   uv run pytest
 
 Rust Code
 =========
@@ -105,10 +105,10 @@ Running Tests
 .. code:: bash
 
    # Run all tests
-   poetry run pytest
+   uv run pytest
 
    # Run with coverage
-   poetry run pytest --cov=read_aconity_layers
+   uv run pytest --cov=read_aconity_layers
 
    # Run Rust tests
    cargo test
@@ -144,14 +144,14 @@ Building Documentation
 .. code:: bash
 
    # Install documentation dependencies
-   poetry install --with docs
+   uv sync --group docs
 
    # Build documentation
    cd docs
    make html
 
    # Or build manually
-   poetry run sphinx-build -b html . _build/html
+   uv run sphinx-build -b html . _build/html
 
    # Serve locally (optional)
    make serve
@@ -199,9 +199,8 @@ The project uses pre-commit hooks that run automatically:
 
 -  Code formatting (Ruff, rustfmt)
 -  Linting (Ruff, Clippy)
--  Type checking (MyPy)
+-  Type checking (ty)
 -  Version bump validation
--  Poetry validation
 
 These checks must pass before commits are accepted.
 
@@ -253,7 +252,7 @@ Adding a New Function
 
 #. **Implement in Rust** (``src/rust_fn/mod.rs``)
 #. **Add Python binding** (``src/lib.rs``)
-#. **Update type stubs** (``read_layers.pyi``)
+#. **Update type stubs** (``read_aconity_layers.pyi``)
 #. **Add tests** for both Rust and Python
 #. **Update documentation**
 
@@ -262,8 +261,7 @@ Debugging Build Issues
 
 -  **Check Rust version**: Must be 1.70+
 -  **Verify PyO3 compatibility**: Should match Python version
--  **Clear build cache**: ``cargo clean`` and ``poetry env remove
+-  **Clear build cache**: ``cargo clean`` and ``rm -rf .venv``
-   --all``
 -  **Check dependencies**: Ensure all dev dependencies are installed
 
 Profiling Performance

docs/installation.rst

@@ -28,7 +28,7 @@ Prerequisites
 
 -  Rust 1.70 or higher
 -  Python 3.11 or higher
--  Poetry (for development)
+-  uv (for development)
 
 Build Steps
 ===========
@@ -44,19 +44,19 @@ Build Steps
 
    .. code:: bash
 
-      poetry install
+      uv sync
 
 #. Build the Rust extension:
 
    .. code:: bash
 
-      poetry run maturin develop
+      uv run maturin develop
 
 #. Run tests to verify installation:
 
    .. code:: bash
 
-      poetry run pytest
+      uv run pytest
 
 **************************
  Development Installation
@@ -66,12 +66,12 @@ For development work, you'll also want the development dependencies:
 
 .. code:: bash
 
-   poetry install --with dev,docs
+   uv sync --group dev --group docs
 
 This installs additional tools for:
 
 -  Code formatting (ruff)
--  Type checking (mypy)
+-  Type checking (ty)
 -  Testing (pytest)
 -  Documentation building (sphinx)
 

docs/justfile

@@ -1,50 +1,60 @@
 # Justfile for Sphinx documentation
 
-sphinxopts := ""
+_sphinxopts := ""
-sphinxbuild := "poetry run sphinx-build"
+_sphinxbuild := "uv run sphinx-build"
-sourcedir := "."
+_sourcedir := "."
-builddir := "./_build"
+_builddir := "./_build"
+
+set export
+CARGO_INSTALL_ROOT := ".cargo"
 
 # Default recipe - equivalent to "just" without arguments
 default: help
 
 # Show help
-help:
+help sphinxbuild=_sphinxbuild sourcedir=_sourcedir builddir=_builddir sphinxopts=_sphinxopts:
     @{{sphinxbuild}} -M help "{{sourcedir}}" "{{builddir}}" {{sphinxopts}}
 
-# Build the Rust extension first (required for autodoc)
+# Ensure sphinx-rustdocgen has been installed
+ensure-rustdocgen:
+    cargo install sphinx-rustdocgen
+
+# Build the Rust extension
 build-extension:
     @echo "Checking Rust toolchain..."
     @which cargo > /dev/null || (echo "Error: Rust/Cargo not found. Please install Rust toolchain." && exit 1)
-    cd .. && poetry run maturin develop
+    cd .. && uv run maturin develop
 
 # Clean build directory
-clean:
+clean builddir=_builddir:
     rm -rf {{builddir}}/*
 
 # Build HTML documentation
-html: build-extension
+html sphinxbuild=_sphinxbuild sourcedir=_sourcedir builddir=_builddir sphinxopts=_sphinxopts: ensure-rustdocgen build-extension
     {{sphinxbuild}} -b html "{{sourcedir}}" "{{builddir}}/html" {{sphinxopts}}
     @echo
     @echo "Build finished. The HTML pages are in {{builddir}}/html."
 
+# Build HTML for with a specific out directory
+html_out builddir=_builddir: (html _sphinxbuild _sourcedir builddir _sphinxopts)
+
 # Build and serve documentation locally
-serve: html
+serve sphinxbuild=_sphinxbuild sourcedir=_sourcedir builddir=_builddir sphinxopts=_sphinxopts: (html sphinxbuild sourcedir builddir sphinxopts)
     @echo "Serving documentation at http://localhost:8000"
     cd {{builddir}}/html && python -m http.server 8000
 
 # Build documentation with live reload (requires sphinx-autobuild)
-livehtml: build-extension
+livehtml sourcedir=_sourcedir builddir=_builddir sphinxopts=_sphinxopts: ensure-rustdocgen build-extension
-    poetry run sphinx-autobuild "{{sourcedir}}" "{{builddir}}/html" {{sphinxopts}}
+    uv run sphinx-autobuild "{{sourcedir}}" "{{builddir}}/html" {{sphinxopts}}
 
 # Check for broken links
-linkcheck:
+linkcheck sphinxbuild=_sphinxbuild sourcedir=_sourcedir builddir=_builddir sphinxopts=_sphinxopts:
     {{sphinxbuild}} -b linkcheck "{{sourcedir}}" "{{builddir}}/linkcheck" {{sphinxopts}}
 
 # Build all formats
-all: html
+all sphinxbuild=_sphinxbuild sourcedir=_sourcedir builddir=_builddir sphinxopts=_sphinxopts: (html sphinxbuild sourcedir builddir sphinxopts)
 
 # Catch-all recipe for Sphinx targets (equivalent to Make's % target)
 # Usage: just sphinx <target> [options]
-sphinx target *options="":
+sphinx target sphinxbuild=_sphinxbuild sourcedir=_sourcedir builddir=_builddir sphinxopts=_sphinxopts *options="":
     @{{sphinxbuild}} -M {{target}} "{{sourcedir}}" "{{builddir}}" {{sphinxopts}} {{options}}

docs/readme_top.rst

@@ -23,8 +23,9 @@
 .. image:: https://readthedocs.org/projects/read-aconity-layers/badge/?version=latest
   :target: https://read-aconity-layers.readthedocs.io/en/latest/?badge=latest
 
-.. image:: https://coveralls.io/repos/github/Cian-H/read-aconity-layers/badge.svg?branch=main
+.. image:: https://coveralls.io/repos/github/Cian-H/read_aconity_layers/badge.svg?branch=main
-   :target: https://coveralls.io/github/Cian-H/read-aconity-layers?branch=main
+  :target: https://coveralls.io/github/Cian-H/read_aconity_layers?branch=main
+
 
 .. image:: https://img.shields.io/badge/code%20style-Ruff-D7FF64.svg
   :target: https://github.com/astral-sh/ruff
@@ -33,3 +34,4 @@
 
 A library for fast reading of layer data from the aconity mini powder
 bed fusion machine.
+

docs/requirements.txt

@@ -1,540 +0,0 @@
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-    --hash=sha256:4c2529b320eb9e35af0fa3016c187dffb84a3ecc572bcee7c3ce302bfeba52bf \
-    --hash=sha256:54479983bd5fb469c38f2f5c7e3a24f9a4e70594cd68cd1fa6b9340dadaff7cf \
-    --hash=sha256:558d023b3df0bffe50a04e710bc87742de35060580a293c2a984299ed83bc4e4 \
-    --hash=sha256:5756779642579d902eed757b21b0164cd6fe338506a8083eb58af5c372e39d9a \
-    --hash=sha256:592f1a9fe869c778694f0aa806ba0374e97648ab57936f092fd9d87f8bc03665 \
-    --hash=sha256:595b6c3969023ecf9041b2936ac3827e4623bfa3ccf007575f04c5a6aa318c22 \
-    --hash=sha256:5a939de6b7b4e18ca683218320fc67ea886038265fd1ed30173f5ce3f8e85675 \
-    --hash=sha256:5d54b09eba2bada6011aea5375542a157637b91029687eb4fdb2dab11059c1b4 \
-    --hash=sha256:5df592cd503496351d6dc14f7cdad49f268d8e618f80dce0cd5a36b93c3fc08d \
-    --hash=sha256:5f4c04ead5aed67c8a1a20491d54cdfba5884507a48dd798ecaf13c74c4489f5 \
-    --hash=sha256:64dee438fed052b52e4f98f76c5790513235efaa1ef7f3f2192c392cd7c91b65 \
-    --hash=sha256:66dd88c918e3287efc22409d426c8f729688d89a0c587c88971a0faa2c2f3792 \
-    --hash=sha256:678999709e68425ae2593acf2e3ebcbcf2e69885a5ee78f9eb80e6e371f1bf57 \
-    --hash=sha256:67f2b6de947f8c757db2db9c71527933ad0019737ec374a8a6be9a956786aaf9 \
-    --hash=sha256:693f0192126df6c2327cce3baa7c06f2a117575e32ab2308f7f8216c29d9e2e3 \
-    --hash=sha256:746ee8dba912cd6fc889a8147168991d50ed70447bf18bcda7039f7d2e3d9151 \
-    --hash=sha256:756c56e867a90fb00177d530dca4b097dd753cde348448a1012ed6c5131f8b7d \
-    --hash=sha256:76d1f20b1c7a2fa82367e04982e708723ba0e7b8d43aa643d3dcd404d74f1475 \
-    --hash=sha256:7f493881579c90fc262d9cdbaa05a6b54b3811c2f300766748db79f098db9940 \
-    --hash=sha256:823c248b690b2fd9303ba00c4f66cd5e2d8c3ba4aa968b2779be9532a4dad431 \
-    --hash=sha256:82544de02076bafba038ce055ee6412d68da13ab47f0c60cab827346de828dee \
-    --hash=sha256:8dd8327c795b3e3f219760fa603dcae1dcc148172290a8ab15158cf85a953413 \
-    --hash=sha256:8fdc51055e6ff4adeb88d58a11042ec9a5eae317a0a53d12c062c8a8865909e8 \
-    --hash=sha256:a625e06551975f4b7ea7102bc43895b90742746797e2e14b70ed61c43a90f09b \
-    --hash=sha256:abdc0c6c8c648b4805c5eacd131910d2a7f6455dfd3becab248ef108e89ab16a \
-    --hash=sha256:ac017dd64572e5c3bd01939121e4d16cf30e5d7e110a119399cf3133b63ad054 \
-    --hash=sha256:ac1e5c9054fe23226fb11e05a6e630837f074174c4c2f0fe442996112a6de4fb \
-    --hash=sha256:ac60e3b188ec7574cb761b08d50fcedf9d77f1530352db4eef1707fe9dee7205 \
-    --hash=sha256:b359ed09954d7c18bbc1680f380c7301f92c60bf924171629c5db97febb12f04 \
-    --hash=sha256:b7643a03db5c95c799b89b31c036d5f27eeb4d259c798e878d6937d71832b1e4 \
-    --hash=sha256:ba9e56e8ceeeedb2e080147ba85ffcd5cd0711b89576b83784d8605a7df455fa \
-    --hash=sha256:c338ffa0520bdb12fbc527265235639fb76e7bc7faafbb93f6ba80d9c06578a9 \
-    --hash=sha256:cad21560da69f4ce7658ca2cb83138fb4cf695a2ba3e475e0559e05991aa8122 \
-    --hash=sha256:d08eb4c2b7d6c41da6ca0600c077e93f5adcfd979cd777d747e9ee624556da4b \
-    --hash=sha256:d50fd1ee42388dcfb2b3676132c78116490976f1300da28eb629272d5d93e905 \
-    --hash=sha256:d591f8de75824cbb7acad4e05d2d710484f15f29d4a915092675ad3456f11770 \
-    --hash=sha256:d5f6b181bb38171a8ad1d6aa58a67a6aa9d4b38d0f8c5f496b9e42561dfc62fe \
-    --hash=sha256:d63efaa0cd96cf0c5fe4d581521d9fa87744540d4bc999ae6e08595a1014b45b \
-    --hash=sha256:d99e5546bf73dbad5bf3547174cd6cb8ba7273062a23808ffea025ecb1cf8562 \
-    --hash=sha256:e09473f095a819042ecb2ab9465aee615bd9c2028e4ef7d933600a8401c79561 \
-    --hash=sha256:e8b56bdcdb4505c8078cb6c7157d9811a85790f2f2b3632c7d1462ab5783d215 \
-    --hash=sha256:ee443ef070bb3b6ed74514f5efaa37a252af57c90eb33b956d35c8e9c10a1931 \
-    --hash=sha256:f29d80eb9a9263b8d109135351caf568cc3f80b9928bccde535c235de55c22d9 \
-    --hash=sha256:f7a866fbc1e97b5c617ee4116daaa09b722101d4a3c170c787450ba409f9736f \
-    --hash=sha256:fcd5cf9e305d7b8338754470cf69cf81f420459dbae8a3b40cee57417f4614a7

pyproject.toml

@@ -9,43 +9,37 @@ classifiers = [
 ]
 authors = [{ name = "Cian Hughes", email = "chughes000@gmail.com" }]
 license = { text = "MIT" }
-readme = "README.md"
+readme = "README.rst"
 dynamic = ["version"]
+dependencies = [
+    "numpy>=2.0.0,<3.0.0",
+]
 
 [project.urls]
-github = "https://github.com/Cian-H/read_aconity_layers"
+repository = "https://github.com/Cian-H/read_aconity_layers"
+documentation = "https://read-aconity-layers.readthedocs.io/"
 
-[tool.poetry]
+[dependency-groups]
-name = "read_aconity_layers"
+dev = [
-description = "A utility for fast reading of layer data from the aconity mini powder bed fusion machine"
+    "ruff>=0.11.11,<0.17.0",
-authors = ["Cian Hughes <chughes000@gmail.com>"]
+    "ty>=0.0.51",
-license = "MIT"
+    "pytest>=8.3.5,<10.0.0",
-readme = "README.md"
+    "loguru>=0.7.3",
-package-mode = false
+    "pytest-cov>=6.1.1,<8.0.0",
-
+    "maturin>=1.8.6",
-[tool.poetry.dependencies]
+]
-python = "^3.11"
+docs = [
-maturin = "^1.8.6"
+    "sphinx>=8.2.3",
-numpy = ">=2.0.0,<3.0.0"
+    "sphinx-autodoc-typehints>=3.2.0",
-
+    "sphinx-copybutton>=0.5.2",
-[tool.poetry.group.dev.dependencies]
+    "sphinxcontrib-rust>=0.8.1,<1.3.0",
-ruff = "^0.11.11"
+    "myst-parser>=4.0.1",
-mypy = "^1.15.0"
+    "sphinx-autobuild>=2024.10.3,<2026.0.0",
-pytest = "^8.3.5"
+    "pydata-sphinx-theme>=0.16.1,<0.21.0",
-loguru = "^0.7.3"
+]
-pytest-cov = "^6.1.1"
-
-[tool.poetry.group.docs.dependencies]
-sphinx = "^8.2.3"
-sphinx-autodoc-typehints = "^3.2.0"
-sphinx-copybutton = "^0.5.2"
-sphinxcontrib-rust = "^0.8.1"
-myst-parser = "^4.0.1"
-sphinx-autobuild = "^2024.10.3"
-pydata-sphinx-theme = "^0.16.1"
 
 [build-system]
-requires = ["maturin>=1.7,<2.0"]
+requires = ["maturin>=1.14,<2.0"]
 build-backend = "maturin"
 
 [tool.maturin]
@@ -212,11 +206,9 @@ max-complexity = 10
 [tool.ruff.lint.flake8-annotations]
 mypy-init-return = true
 
-[tool.mypy]
+[tool.ty]
-check_untyped_defs = true
+[tool.ty.src]
-ignore_missing_imports = true
+exclude = ["docs/"]
-exclude = ["docs/", "tests/"]
 
 [tool.pytest.ini_options]
 testpaths = ["tests"]
-pythonpath = [".venv/bin/python"]

requirements.txt

@@ -1,70 +1,310 @@
-maturin==1.8.6 ; python_version >= "3.11" and python_version < "4.0" \
+# This file was autogenerated by uv via the following command:
-    --hash=sha256:0e0dc2e0bfaa2e1bd238e0236cf8a2b7e2250ccaa29c1aa8d0e61fa664b0289d \
+#    uv export --frozen --output-file=requirements.txt
-    --hash=sha256:1bf4c743dd2b24448e82b8c96251597818956ddf848e1d16b59356512c7e58d8 \
+-e .
-    --hash=sha256:24f66624db69b895b134a8f1592efdf04cd223c9b3b65243ad32080477936d14 \
+colorama==0.4.6 ; sys_platform == 'win32' \
-    --hash=sha256:4dd2e2f005ca63ac7ef0dddf2d65324ee480277a11544dcc4e7e436af68034dd \
+    --hash=sha256:08695f5cb7ed6e0531a20572697297273c47b8cae5a63ffc6d6ed5c201be6e44 \
-    --hash=sha256:4ea89cf76048bc760e12b36b608fc3f5ef4f7359c0895e9afe737be34041d948 \
+    --hash=sha256:4f1d9991f5acc0ca119f9d443620b77f9d6b33703e51011c16baf57afb285fc6
-    --hash=sha256:5c0ff7ad43883920032b63c94c76dcdd5758710d7b72b68db69e7826c40534ac \
+    # via
-    --hash=sha256:62a65f70ebaadd6eb6083f5548413744f2ef12400445778e08d41d4facf15bbe \
+    #   loguru
-    --hash=sha256:6bc9281b90cd37e2a7985f2e5d6e3d35a1d64cf6e4d04ce5ed25603d162995b9 \
+    #   pytest
-    --hash=sha256:b0637604774e2c50ab48a0e9023fe2f071837ecbc817c04ec28e1cfcc25224c2 \
+coverage==7.15.2 \
-    --hash=sha256:b1e786ec9b5f7315c7e3fcc62b0715f9d99ffe477b06d0d62655a71e6a51a67b \
+    --hash=sha256:075560438765b7a2ef43bf7aa7758661b53d889df47f062a31bda6c1ade553a2 \
-    --hash=sha256:bec5948c6475954c8089b17fae349966258756bb2ca05e54099e476a08070795 \
+    --hash=sha256:0901cfe6c13bcd2302da4f83e884555d2a22bda6e4c476f09ef204ba20ca536e \
-    --hash=sha256:ca30fdb158a24cf312f3e53072a6e987182c103fa613efea2d28b5f52707d04a \
+    --hash=sha256:094dd37f3ef7b2da8b068b583d1f4c40f91c65197e16c52a71962d5d537fc5db \
-    --hash=sha256:dade5edfaf508439ff6bbc7be4f207e04c0999c47d9ef7e1bae16258e76b1518
+    --hash=sha256:09f5c6ec5901f667bd97dd140b5b9a2586b10efec66f46fb1e6d8135f8b95bdf \
-numpy==2.2.6 ; python_version >= "3.11" and python_version < "4.0" \
+    --hash=sha256:0e55510bc98ae943cece9e667a6c0fe94c6a92913720dea34243657a17993d0c \
-    --hash=sha256:038613e9fb8c72b0a41f025a7e4c3f0b7a1b5d768ece4796b674c8f3fe13efff \
+    --hash=sha256:1121caa19159a38b5463eaae4b1e1fde81e525b15ecc5e000cd5b1a108f743a8 \
-    --hash=sha256:0678000bb9ac1475cd454c6b8c799206af8107e310843532b04d49649c717a47 \
+    --hash=sha256:1268ac8fb9ddcd783d3948dbabaf80a5d53bfdaa0575e873e2139a692f797443 \
-    --hash=sha256:0811bb762109d9708cca4d0b13c4f67146e3c3b7cf8d34018c722adb2d957c84 \
+    --hash=sha256:1473b3ba8e7ee0f076117b1a72c23f579a2b9e2bb742f48a8d86ea27ca93f91a \
-    --hash=sha256:0b605b275d7bd0c640cad4e5d30fa701a8d59302e127e5f79138ad62762c3e3d \
+    --hash=sha256:17c432b5f73ad52ef46fb06019f6fa7c66ce381961cf0f7dfd1d3a4bd3a98145 \
-    --hash=sha256:0bca768cd85ae743b2affdc762d617eddf3bcf8724435498a1e80132d04879e6 \
+    --hash=sha256:1adac78e5abc7c5438f7a209c9ca69d06542f0bf481d728b6989ea80b813fdf9 \
-    --hash=sha256:1bc23a79bfabc5d056d106f9befb8d50c31ced2fbc70eedb8155aec74a45798f \
+    --hash=sha256:1cd7a5beb7af3e864a13b1f0fb26efd3695da43ef0daf71e586adfffaf34d5b2 \
-    --hash=sha256:287cc3162b6f01463ccd86be154f284d0893d2b3ed7292439ea97eafa8170e0b \
+    --hash=sha256:1d16e3a7104ea84f03e614611b3edbf6fb6892554b3ab0fe7fbb3f2b2ef04376 \
-    --hash=sha256:37c0ca431f82cd5fa716eca9506aefcabc247fb27ba69c5062a6d3ade8cf8f49 \
+    --hash=sha256:25fd15dd40a0a2c51a500d664ca29053c09c3259d998407bf982b6e114696138 \
-    --hash=sha256:37e990a01ae6ec7fe7fa1c26c55ecb672dd98b19c3d0e1d1f326fa13cb38d163 \
+    --hash=sha256:2617f8799d268fabdeef42a7e89ac3a23e1deee9025427db2df970f99a89a578 \
-    --hash=sha256:389d771b1623ec92636b0786bc4ae56abafad4a4c513d36a55dce14bd9ce8571 \
+    --hash=sha256:26c3b04a6377fd7c09800921fa934e3a17c0020439cd59df73e73ae1d4b6a78c \
-    --hash=sha256:3d70692235e759f260c3d837193090014aebdf026dfd167834bcba43e30c2a42 \
+    --hash=sha256:29c052f7c83ccfcc5c577eaae025d2e4a9bb80daf03c0ac31c996e83b000ce88 \
-    --hash=sha256:41c5a21f4a04fa86436124d388f6ed60a9343a6f767fced1a8a71c3fbca038ff \
+    --hash=sha256:2f1ec6f304b156669cfde653b4e9a953f5de87e247ea02ac599bce0ab2744036 \
-    --hash=sha256:481b49095335f8eed42e39e8041327c05b0f6f4780488f61286ed3c01368d491 \
+    --hash=sha256:2fbeeeecea279727f8ac16c8e1133ddfeee793e985c86ae343d6a5ce744eef8c \
-    --hash=sha256:4eeaae00d789f66c7a25ac5f34b71a7035bb474e679f410e5e1a94deb24cf2d4 \
+    --hash=sha256:2ff08701be2d1556fc78b326c80a3e8042da09352ecb3819105f8e386c8a3071 \
-    --hash=sha256:55a4d33fa519660d69614a9fad433be87e5252f4b03850642f88993f7b2ca566 \
+    --hash=sha256:38c9518b7103826c403a461544e3c2e77151e8676d06eaed85911a97e962584a \
-    --hash=sha256:5a6429d4be8ca66d889b7cf70f536a397dc45ba6faeb5f8c5427935d9592e9cf \
+    --hash=sha256:3df60dc267f0a2ca23cb7a9ab1109c62b9335ffbf519fcfe167157c28c09b81d \
-    --hash=sha256:5bd4fc3ac8926b3819797a7c0e2631eb889b4118a9898c84f585a54d475b7e40 \
+    --hash=sha256:3ed010aa1b69cda8e827aabfca9866216c980e2dca82ab9a78c5f83689964c8b \
-    --hash=sha256:5beb72339d9d4fa36522fc63802f469b13cdbe4fdab4a288f0c441b74272ebfd \
+    --hash=sha256:40f633c5c5fc783732f6312280122e859538fa24461235597c13d803ea9a108a \
-    --hash=sha256:6031dd6dfecc0cf9f668681a37648373bddd6421fff6c66ec1624eed0180ee06 \
+    --hash=sha256:42ec3d989421b174a2ab607c1539f24127ad362757b7f1c0c0d7a2993f7eb37b \
-    --hash=sha256:71594f7c51a18e728451bb50cc60a3ce4e6538822731b2933209a1f3614e9282 \
+    --hash=sha256:434e68d531858205895eb0d74b73d20b84260de426387d53c422a5acda2cf050 \
-    --hash=sha256:74d4531beb257d2c3f4b261bfb0fc09e0f9ebb8842d82a7b4209415896adc680 \
+    --hash=sha256:44826758cfe73fcd0e6af5deb4ba6d5417cc1d13df3acb35c93484a11160f846 \
-    --hash=sha256:7befc596a7dc9da8a337f79802ee8adb30a552a94f792b9c9d18c840055907db \
+    --hash=sha256:4510fb9cdf6bb02dfa6af0be4a534b8102d086e22e4a33f8836df663da3d660d \
-    --hash=sha256:894b3a42502226a1cac872f840030665f33326fc3dac8e57c607905773cdcde3 \
+    --hash=sha256:48ccc6395958eda89093ecdc35644c86f23a8b23a7f4d44958812b721aad67c1 \
-    --hash=sha256:8e41fd67c52b86603a91c1a505ebaef50b3314de0213461c7a6e99c9a3beff90 \
+    --hash=sha256:4d3361879d736f469f45723c11ea1a5bbdaf1f6928f0e632c940378b5aa9b660 \
-    --hash=sha256:8e9ace4a37db23421249ed236fdcdd457d671e25146786dfc96835cd951aa7c1 \
+    --hash=sha256:582edc45c2040543fef83341be23c43024a3ab3ae0c2d8bc498a06282905ad40 \
-    --hash=sha256:8fc377d995680230e83241d8a96def29f204b5782f371c532579b4f20607a289 \
+    --hash=sha256:63022c4c8dec1d0342f05c3ede99842fe3d007689acc45e86f123a1746e4a026 \
-    --hash=sha256:9551a499bf125c1d4f9e250377c1ee2eddd02e01eac6644c080162c0c51778ab \
+    --hash=sha256:67d7602480a47bdf5b675635403625553ebaa70d5a62a657c035149fd401cea0 \
-    --hash=sha256:b0544343a702fa80c95ad5d3d608ea3599dd54d4632df855e4c8d24eb6ecfa1c \
+    --hash=sha256:68af907f595ab01a78f794932ff3bdf929c316d3000810d38dbc247129e26f8b \
-    --hash=sha256:b093dd74e50a8cba3e873868d9e93a85b78e0daf2e98c6797566ad8044e8363d \
+    --hash=sha256:6aa28cfb6488e5453b5b762d65f73aa586380f6693a04d58078ce228a29b06c0 \
-    --hash=sha256:b412caa66f72040e6d268491a59f2c43bf03eb6c96dd8f0307829feb7fa2b6fb \
+    --hash=sha256:6c0be82b4d4aa5b2704e08518e2252f3e3d110164bcca826816801052e48a7aa \
-    --hash=sha256:b4f13750ce79751586ae2eb824ba7e1e8dba64784086c98cdbbcc6a42112ce0d \
+    --hash=sha256:6f6966fc30e6f06ca8f98fb0ce51eda6b111b3ee8d066a8b1ec9e77fa06ab55d \
-    --hash=sha256:b64d8d4d17135e00c8e346e0a738deb17e754230d7e0810ac5012750bbd85a5a \
+    --hash=sha256:6fc448c377d6eeb00a47c673494bd9bae29280ca53987e1869e67ebedfe20658 \
-    --hash=sha256:ba10f8411898fc418a521833e014a77d3ca01c15b0c6cdcce6a0d2897e6dbbdf \
+    --hash=sha256:728a33676d4c3f0db977990a4bd421dcaa3be3e53b5b6273036fff6666008e89 \
-    --hash=sha256:bd48227a919f1bafbdda0583705e547892342c26fb127219d60a5c36882609d1 \
+    --hash=sha256:7466cc7ab6dc0db871d264bf99e8779f0917ee63d40730af0552f71535a6e072 \
-    --hash=sha256:c1f9540be57940698ed329904db803cf7a402f3fc200bfe599334c9bd84a40b2 \
+    --hash=sha256:77f091ea3a9cc611cd29f433565476bc1936c084ac8eee00ea0e7e70c27e4199 \
-    --hash=sha256:c820a93b0255bc360f53eca31a0e676fd1101f673dda8da93454a12e23fc5f7a \
+    --hash=sha256:77f0ef5011df53a4bd1b35211ab122287f8d9b8d7aa1c4553e5c2deb24b1d446 \
-    --hash=sha256:ce47521a4754c8f4593837384bd3424880629f718d87c5d44f8ed763edd63543 \
+    --hash=sha256:7c63387e21ab21f512c69c9756a8c7dadd322c7275edb064064433c9a09c3743 \
-    --hash=sha256:d042d24c90c41b54fd506da306759e06e568864df8ec17ccc17e9e884634fd00 \
+    --hash=sha256:7d29ca7bd67af6e12e74632d65f026eabc1364da5c254494cd914446a28a3ef7 \
-    --hash=sha256:de749064336d37e340f640b05f24e9e3dd678c57318c7289d222a8a2f543e90c \
+    --hash=sha256:7dc2950a2992cd676d35c20ae63522836deeb034f08874699d14068710af3dc1 \
-    --hash=sha256:e1dda9c7e08dc141e0247a5b8f49cf05984955246a327d4c48bda16821947b2f \
+    --hash=sha256:7e8f27131dc7cd53de2c137dd207b3720919320b3c20d499dc30aa9ee6173287 \
-    --hash=sha256:e29554e2bef54a90aa5cc07da6ce955accb83f21ab5de01a62c8478897b264fd \
+    --hash=sha256:81f382c5a94b434ec1f6da607edb904c76d7212e618cd4d1bc9f97bed4120ef5 \
-    --hash=sha256:e3143e4451880bed956e706a3220b4e5cf6172ef05fcc397f6f36a550b1dd868 \
+    --hash=sha256:835ec4e20b45f0a7f63ed78f94065aca00de033403df8377bfe8b9c6abc0a7be \
-    --hash=sha256:e8213002e427c69c45a52bbd94163084025f533a55a59d6f9c5b820774ef3303 \
+    --hash=sha256:8bb9f4b4279187560796a4cdaca3b0a93dd97e48ee667df005f4ed9a97403688 \
-    --hash=sha256:efd28d4e9cd7d7a8d39074a4d44c63eda73401580c5c76acda2ce969e0a38e83 \
+    --hash=sha256:8c726b232659cbd2ae57ade46509eb068c9bd7a06df9fcbff6fe484870006934 \
-    --hash=sha256:f0fd6321b839904e15c46e0d257fdd101dd7f530fe03fd6359c1ea63738703f3 \
+    --hash=sha256:913b6c56e110da40e035bbd168353bf7aaa2544a5eaccea5d98a4629aac156c7 \
-    --hash=sha256:f1372f041402e37e5e633e586f62aa53de2eac8d98cbfb822806ce4bbefcb74d \
+    --hash=sha256:97a5c5457a9fb1d6c4e06cfb5dc835871fbfb6a6a51addc9e925bdeff5ef7440 \
-    --hash=sha256:f2618db89be1b4e05f7a1a847a9c1c0abd63e63a1607d892dd54668dd92faf87 \
+    --hash=sha256:9854ca62c152874b2060772503535be2e8f53f70b8aaa7686b094888d872f984 \
-    --hash=sha256:f447e6acb680fd307f40d3da4852208af94afdfab89cf850986c3ca00562f4fa \
+    --hash=sha256:9911f31aad8906abe337c271343485cf20df5e70df5d2f57f9f136e7b55f26bc \
-    --hash=sha256:f92729c95468a2f4f15e9bb94c432a9229d0d50de67304399627a943201baa2f \
+    --hash=sha256:9b5bd92ff1ec22e535eab0de75fa6db021992791f461a2aceb7822c625a1187d \
-    --hash=sha256:f9f1adb22318e121c5c69a09142811a201ef17ab257a1e66ca3025065b7f53ae \
+    --hash=sha256:9deddf09eecb717b7f980414b43d90a5b22ff3967d2949ab29cb0aa83d9e9098 \
-    --hash=sha256:fc0c5673685c508a142ca65209b4e79ed6740a4ed6b2267dbba90f34b0b3cfda \
+    --hash=sha256:9e36686f7a442185db2400b3df171aac520869faf9deb59df687d28659eda2a6 \
-    --hash=sha256:fc7b73d02efb0e18c000e9ad8b83480dfcd5dfd11065997ed4c6747470ae8915 \
+    --hash=sha256:9f4432898c4bf2fba0435bbe35dd4437d7264565e5a88a21f5b49d8662a6b629 \
-    --hash=sha256:fd83c01228a688733f1ded5201c678f0c53ecc1006ffbc404db9f7a899ac6249 \
+    --hash=sha256:a0f47002c6eeb7c280228467a4cb0cc15ca2103a8421b986b2d3ec04a0f9bd8b \
-    --hash=sha256:fe27749d33bb772c80dcd84ae7e8df2adc920ae8297400dabec45f0dedb3f6de \
+    --hash=sha256:a164b50081fc7357331c4024ef4d17b78ba325f8380d05f5a69599a7e05257ee \
-    --hash=sha256:fee4236c876c4e8369388054d02d0e9bb84821feb1a64dd59e137e6511a551f8
+    --hash=sha256:a29ec5305a7335aacee2d799e3422e91e1c8a12474986e2b3b07e315c91be82f \
+    --hash=sha256:a300c6934e0989c327b9e8a1e110329da4641149f872bbe9f70168be66da76c1 \
+    --hash=sha256:a4c46b247b5d4b78f613bd89fea926d32b25c6cc61a50bd1e99ba310348f3dad \
+    --hash=sha256:a638db90c61cd219aeee65e83a24fdaa57269a741ae0cf773309208ac862cee3 \
+    --hash=sha256:a63b9e190711134d581c4d703df5df09851b1acf99792c7aacbbe9f41f0283c9 \
+    --hash=sha256:aaccad4129d735a8a4d526f26929894c9a4e8ef7034566f210b176749d6906e3 \
+    --hash=sha256:ae901f7e55ba405c84ee1cab3d3e962e4e871e4a2bcb9c90911adbd69b42ac5a \
+    --hash=sha256:afa29e2eff3d5729267e2cb2fd4ce9d61c952932fb2694e34ccb5d9540c6a296 \
+    --hash=sha256:affd532502d34c0472d0cdb181325c89f1d2c44992fef0c17e88e7b1576259a1 \
+    --hash=sha256:b171bdd71cb7ff792bf32e376173b0ace7e7963e7e57c58dfc42063a6a7174cd \
+    --hash=sha256:b868acc62aa5de3be7a9d05c2333bf8359ca987e43f9cb30ff8fbda6a024ab73 \
+    --hash=sha256:b9a6367e4aff723e8ee8190836836124284e8fcd4265e307c844010cfa074f3f \
+    --hash=sha256:bbc808daf4f5cd567af8075ecc72d21c6dfef9a254709a621a84c217c935ebc0 \
+    --hash=sha256:bbf44513ceb1589e31948e20eafbde9deaface90e1a1afa5f5f77b4423d17ce6 \
+    --hash=sha256:bcc0aae933921d03096f53b0b03eeb702129fd406dee59f08d2efacc68681fa5 \
+    --hash=sha256:bfd341ccf78128e72c094bc70cc25b3ef309c33c7c2c66ba3ed4309549e02de1 \
+    --hash=sha256:c6a98d698f9e2c8008d0370ec7fc452ebfcc530002ae2d0061170d768b992589 \
+    --hash=sha256:cb0fddaa6884be6aae36ced9544b5e90f7d5f03845a2853bf47a14953a4e8688 \
+    --hash=sha256:cee0f89f4767a6057c8fbf168f8135f18be651300496086bd873e3189fed0487 \
+    --hash=sha256:d17d7512151fedfcc64c1821a8977fc9be0dbf495754669afcab7b57abc98ae9 \
+    --hash=sha256:d46e62cb35d91e6e2589fda6d28074426b0e276422b5d2ebef2c6b11dc60dbfd \
+    --hash=sha256:d50dd325e18ec25bfcc10cd7f99b04df1ab9ec76b0918c260e60817ad0643dee \
+    --hash=sha256:db9c8438057e5b0f6a22a0af99c0c1d26b57fbbdbd1be5861ddb8f897fcc3a2d \
+    --hash=sha256:dee88b1ed88587abd8c0269a1fc1f4cc77f7750d1dfde2869e2a123af420e67d \
+    --hash=sha256:dfd3db045e95960ae3683059571e597fda7cc610106a8916f77c5839048c1deb \
+    --hash=sha256:e26ff680768b8095e8874aabe0e9d3a47a2a9f176a8340d05f8604c56457c23a \
+    --hash=sha256:e370c12133095ff18432de8c044962be85a5a96d90c6fcbce8e17e76236d2328 \
+    --hash=sha256:e38def96ad59853824c97953fdcd2c320a84ba3ce99b417db78af8bb6c3db635 \
+    --hash=sha256:e8f91bce78e32343af184c3b7fa28fcf5a9e2641f4b6623d392038f804939188 \
+    --hash=sha256:eb6bcae8d1a9d305351ecb108232441d11c5cfe9de840a04388ba5d2db8d735c \
+    --hash=sha256:f653e5d7248c1191ec988a85c72edeab46c3ff44f90639a4ed4874ec0be90243 \
+    --hash=sha256:fe41909c9515c3bfdb5f02c4d1f857dba322d9a9a1178069b91eea77889df63a
+    # via pytest-cov
+iniconfig==2.3.0 \
+    --hash=sha256:c76315c77db068650d49c5b56314774a7804df16fee4402c1f19d6d15d8c4730 \
+    --hash=sha256:f631c04d2c48c52b84d0d0549c99ff3859c98df65b3101406327ecc7d53fbf12
+    # via pytest
+loguru==0.7.3 \
+    --hash=sha256:19480589e77d47b8d85b2c827ad95d49bf31b0dcde16593892eb51dd18706eb6 \
+    --hash=sha256:31a33c10c8e1e10422bfd431aeb5d351c7cf7fa671e3c4df004162264b28220c
+maturin==1.14.1 \
+    --hash=sha256:15cea8fcb3ba47dd636f50092bb34baea8b04ac777392f23e6bf8a9a61efb894 \
+    --hash=sha256:1a04de0a20188f95c721b5702eed18140bdcccb28c386797093eca3f62f4d4e0 \
+    --hash=sha256:3c9f94640ecc4895e94abaf834a0684430032c865b2748a36c12461fd9252fdd \
+    --hash=sha256:522292398945442cdafa9daeb2271b2340fbde57027b818f923f88eab04174f8 \
+    --hash=sha256:5282dffd4b539d2be245f4e5b1a5ab6bc1033b58f4a4872f5833f9d43c954aa4 \
+    --hash=sha256:994a0c8ba3ad8a92b3a9ee1b02645d200d610216b15cff5102b0fe65e8e08666 \
+    --hash=sha256:9d6577a62cd08e0ceba7a0db06fb098e0c9b1b3429bad747a4f3a18215a1b3df \
+    --hash=sha256:a131d912b5267e640bc96d70f4914e10590aed64082ec9abacba7cea52004224 \
+    --hash=sha256:be18fc568fb76884c0205456336892a75105ec398e6b667cd777c6268bd06d69 \
+    --hash=sha256:be80866363e605d137991b491a741a84cde9ae350183c4c85f49690ca9aaaa65 \
+    --hash=sha256:cd457cd88961156e26379e1155bd287cc0ec1c8b2f1582b0660fb31b87c8842d \
+    --hash=sha256:dfc54ae32e6fcb18302193ab9a30b0b25eefffba994ae13238974805533ef75e \
+    --hash=sha256:f3306078070c1508fd715b9116070cbcaff5959024272a9f1e6f5cb29768b86c \
+    --hash=sha256:ffe5ad71f21d1e6603c4dd75f7fee34adf5ed5ebcebb692886549888ebb329ed
+numpy==2.4.6 \
+    --hash=sha256:001fbb8e08d942dd57599e781f2472269ee7f2755fae407b4f67b2f0b17da3f1 \
+    --hash=sha256:0280e0356c0829a18d9de1cb7eee50ec22ca639878d7240307ca0943d73cd2c4 \
+    --hash=sha256:043191bfa8eab18c776647b62723ac9dddece59743b13f49b2016094129c2b3f \
+    --hash=sha256:06ca2f61ec4385a07a6977c55ba998a4466c123642b4a32694d3128fce18c079 \
+    --hash=sha256:0a041d3d761dc3c35cc56ce0351506a02bcbc25f7b169f652435141a17db9096 \
+    --hash=sha256:0ab0a9c4ffb1a6d95ef519fe4247dba8eb6b18ad93999f76b7f657039acabd47 \
+    --hash=sha256:0c9136e14ed34a9e343a31c533d78a9813a69a3148332bce5e9821cb2f996e66 \
+    --hash=sha256:110f8b71aacb688ec69062bb7f6938a0f8acb01b7c1c4beb453c65b6d234584d \
+    --hash=sha256:112b06a867b235ef466ed3508ddf0238050df9c727cafb5301ac385b899189a1 \
+    --hash=sha256:17f9ade344e7d9b464a084d69bcf18fc691cb1db67c62ed80820bf4926d78f0e \
+    --hash=sha256:1e254a00cdf42b1e4d5b3d68d33af63268d41340d8885df2ab6470f2e1500147 \
+    --hash=sha256:1e978ec1e8bd0e0e4de6bb75de9d30cbb74db6b6a2bb727618613703ca0167dd \
+    --hash=sha256:25c692919ac5a01f170a3bfcd62d745b24fd095c353d50812637d6fcab442e75 \
+    --hash=sha256:260a5d70215b61ab4fadf5c7baacd64821842975eea312125ed3c39a6391b063 \
+    --hash=sha256:2803abfebfc990042cd494d8ce2d5f82e9d847af6d35ec486923aa19dbad5e73 \
+    --hash=sha256:29a287e0cf63ff528da061de6b9f64a4618da591ca1046aafc54062e40ca7eab \
+    --hash=sha256:29cb7f67d10b479ff07c17d33e39f78c07f71c40ef30d63c153d340e96cd3fb4 \
+    --hash=sha256:3213d622a0283a39a93d188f3cf72b26862df52fbb4ca3697f51705016523d41 \
+    --hash=sha256:33111801a01c12a8a1e3721f0a9232f8cfc8ae2c6b7098167e6f623c6073f402 \
+    --hash=sha256:357cc07a6d7b0b182ff02249616a03742827ebb1277546b5c7cd7f7620a45698 \
+    --hash=sha256:38efbc8de75c7a0fc1ac190162d892787f3f47b57cc291231aafee36b80982b7 \
+    --hash=sha256:4081eb135ac24158bd51cdfbef16f1c64df7063b1143f24731387137c092bec8 \
+    --hash=sha256:40fdc1ae7125e518ea98e53e69a4ebc27e1fd50510c47b7ea130cf21e5e1d42b \
+    --hash=sha256:4cfe66903cc32a9921a6733d96b19bb6abf310397581bbad89c228f5abaf0ee8 \
+    --hash=sha256:511dbaf848decaaaf4b4ca48032619fb3138710c4bf7da7617765edad1ef96b0 \
+    --hash=sha256:55cced7c52e981362f708ad635198e97a752dfba412cc03c23bbf3bd8d5cd662 \
+    --hash=sha256:56b39e5e0622a09a25bf5baf62f4bcf0cb8a41ae6e2819cf49bbc5a74c083f91 \
+    --hash=sha256:5dbbdb29840ca3d91ee0fece42fc29278886d908280bfec0a5846c6f901a3eb0 \
+    --hash=sha256:5f9fb9157b4ce2971008323afe46053787b526ef624fea915b261468a8421a0f \
+    --hash=sha256:6180d8b35af935aed8ece3a85e0a43f87393ae0ac87c8d2c8bd2c993f7270ef3 \
+    --hash=sha256:68a5124b13fa6cc2086764a20005d30bc0548146f7f5322f02fce212ca14317f \
+    --hash=sha256:68bb27509ac1b9a3443094260f6326150663b06abe40b73a2f81160623da5b67 \
+    --hash=sha256:6f41ae150c4e32db4f3310cdaf64b1593a03dbabe29eec77fc9b50fe64061df6 \
+    --hash=sha256:7265a2f3d436e54ef9f2b52b5c937e6be778781bd97a590319d7348f1c1ca997 \
+    --hash=sha256:72fbe16c6fac95aedf5937fa873445cec2110be35d8a4e9433d7501fd98dae6b \
+    --hash=sha256:7d92c3819208a60205a12a245c91ad70cb0a85336659b19b834205573ac8456e \
+    --hash=sha256:8155154c7c691289fe18f510b5d4657c68c67989f293f0535a91360392ff6538 \
+    --hash=sha256:81a1cca95ed5bb92aa8b10dd2cdc9a0d3853a50fad926c28b5d7e8ea54389627 \
+    --hash=sha256:89cd468399cfd2504718f0ba50e410dca55a170b61a02ad92bb18c8a65186e93 \
+    --hash=sha256:8ad03c0965fb3c692200e74d458ca28c1dbb4ce96f9a479a8aa041ad5fabca02 \
+    --hash=sha256:90f9849678c75fe7afa2d348ac842c168b0a4d3d61919687216dfc547976d853 \
+    --hash=sha256:948424b06129ce883307e8cff868c31396d8dc7630a59c61d70d98dbe70f222c \
+    --hash=sha256:9cd5ffd25db4e7ba6a375693b3fc0fc1791ec636c17db3720da19bde7180ec43 \
+    --hash=sha256:a0df0043bdb289bde1f62da130d20df23d58b45429f752bc7a8fc5325a225ecd \
+    --hash=sha256:a2c306dea656c12c68f51f4cea133cbe78ca7435eb28c735eac1d3ebe73be6e8 \
+    --hash=sha256:a7830bab239b79cda9c08c2da014761cafb48da6150e1da17ac06283f43b6089 \
+    --hash=sha256:a7c711e21628b52034bb5ab8d1bce291f752fcc5e92accc615778acee1ff4778 \
+    --hash=sha256:aaf159caa35993cb1f56fb9b8e4610d35758e7ca005412eb1daa856a78c9c4b1 \
+    --hash=sha256:ae506e6902902557576a26ff33eda8695e7ecb3cb36c3b573a0765dee114ebdb \
+    --hash=sha256:b507f5c4c1d508876d1819b6bf9a49d365b96320b5d4993426b33a23ca4b8261 \
+    --hash=sha256:bf162abab1c1a736333192707cef898e735a5ca00f38f27eeedf44b39d9e85eb \
+    --hash=sha256:c1a2af6c6ef86344a6b0db6b97834208bf598db514f2b155042439b62605601a \
+    --hash=sha256:c2d37ab77531417474168eb79d6d80b14f821a966818505d03013d0833edb7a8 \
+    --hash=sha256:c4fc99836233ea196540b17ab0983aff60ed07941751930f5f4d05bc3b3b7359 \
+    --hash=sha256:d581b735e177fdcdce6fed8e7e8880a3fb6ee4e3653a3ac6af01c6f4c03effc5 \
+    --hash=sha256:d6da64deb6b8ed903e7560180a92f2d804ee1ba5eeb849ac2748b8c1aba1f6d7 \
+    --hash=sha256:d8e8286dd7cea7895157318d1b91cdacac64c479f3cbc8dce548331728484751 \
+    --hash=sha256:ddea102b48f9e339f3948bf22040944184627a30fdf7f858667673b9c5f033c8 \
+    --hash=sha256:dfa20cc6ca228e6b155b11da03825975ce66aea520985dbbddf0f2a5a495c605 \
+    --hash=sha256:e3e5193ef5a3dc73bceee50f7fdc2c90dbb76c42df8d8fae3d1067a583df579e \
+    --hash=sha256:e3eeb0aabd6bd5ce64faae67e9935203a6991b4bc2a485a767fbafb2c5125f45 \
+    --hash=sha256:e5805d5a22fd19c8ccff10a9561f9df94436b0545619ea579db2d3c35294bce2 \
+    --hash=sha256:e85b752a1e912b70eaad4fafbd4d1238007ab221de2009b9a2f5ae7461239895 \
+    --hash=sha256:eaf7fa2de5c0be8ae6ff8e9bea2ccd725e980541244521d8d4b5f3354a27babe \
+    --hash=sha256:ebfb099f8dcf083deef3ac1ca4c1503f387cf76296fcb3816b66f5ecb5f54fdb \
+    --hash=sha256:ece3d2cfe132e7d51f44a832b303895e6f2d499c5e74dfbdb06ee246147a304a \
+    --hash=sha256:ed9749eef4cbd126da3dc1d6bcb3a57f5eb7ac6a6484146bdbf743f552dfc577 \
+    --hash=sha256:ede83e07a75dd06bc501566c1eca2afc0d61677c1472ac9ad93fdee6e638a48d \
+    --hash=sha256:ef4aea96ce4d3b074422cb4f2f64e216bf9e213004bb58ecfdf50ea02ea8eb9a \
+    --hash=sha256:f3a3570c4a2a16746ac2c31a7c7c7b0c186b95ce902e33db6f28094ed7387dda \
+    --hash=sha256:f407cb6b8e9d6d8c626bc73c945db1706035af8fd632295547bf1c9e46d092d6 \
+    --hash=sha256:f74a575920ab21fe304421a3fc28793d82e299cae9eccb37084e9fc7f3617c20
+    # via read-aconity-layers
+packaging==26.2 \
+    --hash=sha256:5fc45236b9446107ff2415ce77c807cee2862cb6fac22b8a73826d0693b0980e \
+    --hash=sha256:ff452ff5a3e828ce110190feff1178bb1f2ea2281fa2075aadb987c2fb221661
+    # via pytest
+pluggy==1.6.0 \
+    --hash=sha256:7dcc130b76258d33b90f61b658791dede3486c3e6bfb003ee5c9bfb396dd22f3 \
+    --hash=sha256:e920276dd6813095e9377c0bc5566d94c932c33b27a3e3945d8389c374dd4746
+    # via
+    #   pytest
+    #   pytest-cov
+pygments==2.20.0 \
+    --hash=sha256:6757cd03768053ff99f3039c1a36d6c0aa0b263438fcab17520b30a303a82b5f \
+    --hash=sha256:81a9e26dd42fd28a23a2d169d86d7ac03b46e2f8b59ed4698fb4785f946d0176
+    # via pytest
+pytest==9.1.1 \
+    --hash=sha256:1088fbde8f2b49d95a549a195707afa7a76a3ce9bcadc26b6d71f0ffda5fe313 \
+    --hash=sha256:37a86b45efb9a47a61a36449063e8e18d0cab3161329fc099eb21783169c4f0c
+    # via pytest-cov
+pytest-cov==7.1.0 \
+    --hash=sha256:30674f2b5f6351aa09702a9c8c364f6a01c27aae0c1366ae8016160d1efc56b2 \
+    --hash=sha256:a0461110b7865f9a271aa1b51e516c9a95de9d696734a2f71e3e78f46e1d4678
+ruff==0.16.1 \
+    --hash=sha256:07bf434b1c95f4e093be4532068ef4fcf00924eb2ade8796075980902d6fd54a \
+    --hash=sha256:09b05e8b90c2cb06ad63464350e7a45e8e44a2dfe52072ebfba6666ca8d3f596 \
+    --hash=sha256:24e9c631573cbca9d20f1283f8f479b2afa4a8503504822bd71a293889f16743 \
+    --hash=sha256:26e9ca5c9bc3971f20d3cf18a957f52ffd6a5f6564ff15c4912a144dcac22494 \
+    --hash=sha256:30affbcedf59ad5703d9c91f82266e02b47739f797e1a7b6e158e5526a6dae38 \
+    --hash=sha256:39897739f112253ee4fdd2e8aa9a4f9ded99fb2be367d5f31dfa4ded6025584c \
+    --hash=sha256:4d5f2ed10f8242d83fc08d521301089364e3375375705356f20c0e31606ef3ef \
+    --hash=sha256:58edb313b88f0c5460a26adf5f39a37a3be789494a15e3e411e35fa78b89f9a0 \
+    --hash=sha256:67e1e1e3fa4f0c82f0e36d4cd61e661f6e7a6196cb1aa92fe0828fa7b8f257cd \
+    --hash=sha256:82ae3c0c0d74daf17b968a10b7b3bb3ef297ab7de0c1f749646b25e690ccb150 \
+    --hash=sha256:a4665b309891f83f3e3c25447935f1213e9abbd4b5640af7a1f2def9f8d413c1 \
+    --hash=sha256:b0d1e1393b7648079e13669de1c1f4fde06d4583e84d8fd5c1551e0a77a2aa75 \
+    --hash=sha256:b41bdd48fb420987a9b5212e4957c26ad4abce401fa9ea9d4d85843727945f4f \
+    --hash=sha256:d31765e131295b8445caf301e3e8a85b34d1b9b211b4109b7ba457888b051806 \
+    --hash=sha256:dbaadaac38c70239f056d306b7476f246b0bf000fa6b3876402acbf5b227eaf8 \
+    --hash=sha256:e0d4c20532fca4f7fa609369161d968dd28f65d83dabbd61d8e9c7edbf7001f6 \
+    --hash=sha256:fde5a99e2f97479af66edd6622c6d5a2a7592c77cf4153d9e4428f5eeb55b60c \
+    --hash=sha256:fedad7c801dabd3fb9741d76aca39246e6ddd9ca446a015875207bf19f1e6bc7
+tomli==2.4.1 ; python_full_version <= '3.11' \
+    --hash=sha256:01f520d4f53ef97964a240a035ec2a869fe1a37dde002b57ebc4417a27ccd853 \
+    --hash=sha256:0d85819802132122da43cb86656f8d1f8c6587d54ae7dcaf30e90533028b49fe \
+    --hash=sha256:136443dbd7e1dee43c68ac2694fde36b2849865fa258d39bf822c10e8068eac5 \
+    --hash=sha256:1d8591993e228b0c930c4bb0db464bdad97b3289fb981255d6c9a41aedc84b2d \
+    --hash=sha256:2190f2e9dd7508d2a90ded5ed369255980a1bcdd58e52f7fe24b8162bf9fedbd \
+    --hash=sha256:2c1c351919aca02858f740c6d33adea0c5deea37f9ecca1cc1ef9e884a619d26 \
+    --hash=sha256:36d2bd2ad5fb9eaddba5226aa02c8ec3fa4f192631e347b3ed28186d43be6b54 \
+    --hash=sha256:3d48a93ee1c9b79c04bb38772ee1b64dcf18ff43085896ea460ca8dec96f35f6 \
+    --hash=sha256:47149d5bd38761ac8be13a84864bf0b7b70bc051806bc3669ab1cbc56216b23c \
+    --hash=sha256:4ab97e64ccda8756376892c53a72bd1f964e519c77236368527f758fbc36a53a \
+    --hash=sha256:4b605484e43cdc43f0954ddae319fb75f04cc10dd80d830540060ee7cd0243cd \
+    --hash=sha256:504aa796fe0569bb43171066009ead363de03675276d2d121ac1a4572397870f \
+    --hash=sha256:51529d40e3ca50046d7606fa99ce3956a617f9b36380da3b7f0dd3dd28e68cb5 \
+    --hash=sha256:52c8ef851d9a240f11a88c003eacb03c31fc1c9c4ec64a99a0f922b93874fda9 \
+    --hash=sha256:559db847dc486944896521f68d8190be1c9e719fced785720d2216fe7022b662 \
+    --hash=sha256:5a881ab208c0baf688221f8cecc5401bd291d67e38a1ac884d6736cbcd8247e9 \
+    --hash=sha256:5cb41aa38891e073ee49d55fbc7839cfdb2bc0e600add13874d048c94aadddd1 \
+    --hash=sha256:5e262d41726bc187e69af7825504c933b6794dc3fbd5945e41a79bb14c31f585 \
+    --hash=sha256:5ee18d9ebdb417e384b58fe414e8d6af9f4e7a0ae761519fb50f721de398dd4e \
+    --hash=sha256:7008df2e7655c495dd12d2a4ad038ff878d4ca4b81fccaf82b714e07eae4402c \
+    --hash=sha256:734e20b57ba95624ecf1841e72b53f6e186355e216e5412de414e3c51e5e3c41 \
+    --hash=sha256:7c7e1a961a0b2f2472c1ac5b69affa0ae1132c39adcb67aba98568702b9cc23f \
+    --hash=sha256:7f86fd587c4ed9dd76f318225e7d9b29cfc5a9d43de44e5754db8d1128487085 \
+    --hash=sha256:7f94b27a62cfad8496c8d2513e1a222dd446f095fca8987fceef261225538a15 \
+    --hash=sha256:88dceee75c2c63af144e456745e10101eb67361050196b0b6af5d717254dddf7 \
+    --hash=sha256:8a650c2dbafa08d42e51ba0b62740dae4ecb9338eefa093aa5c78ceb546fcd5c \
+    --hash=sha256:8d65a2fbf9d2f8352685bc1364177ee3923d6baf5e7f43ea4959d7d8bc326a36 \
+    --hash=sha256:96481a5786729fd470164b47cdb3e0e58062a496f455ee41b4403be77cb5a076 \
+    --hash=sha256:a120733b01c45e9a0c34aeef92bf0cf1d56cfe81ed9d47d562f9ed591a9828ac \
+    --hash=sha256:b1d22e6e9387bf4739fbe23bfa80e93f6b0373a7f1b96c6227c32bef95a4d7a8 \
+    --hash=sha256:b8c198f8c1805dc42708689ed6864951fd2494f924149d3e4bce7710f8eb5232 \
+    --hash=sha256:c2541745709bad0264b7d4705ad453b76ccd191e64aa6f0fc66b69a293a45ece \
+    --hash=sha256:c742f741d58a28940ce01d58f0ab2ea3ced8b12402f162f4d534dfe18ba1cd6a \
+    --hash=sha256:c7f2c7f2b9ca6bdeef8f0fa897f8e05085923eb091721675170254cbc5b02897 \
+    --hash=sha256:d312ef37c91508b0ab2cee7da26ec0b3ed2f03ce12bd87a588d771ae15dcf82d \
+    --hash=sha256:d4d8fe59808a54658fcc0160ecfb1b30f9089906c50b23bcb4c69eddc19ec2b4 \
+    --hash=sha256:da25dc3563bff5965356133435b757a795a17b17d01dbc0f42fb32447ddfd917 \
+    --hash=sha256:eab21f45c7f66c13f2a9e0e1535309cee140182a9cdae1e041d02e47291e8396 \
+    --hash=sha256:eb0dc4e38e6a1fd579e5d50369aa2e10acfc9cace504579b2faabb478e76941a \
+    --hash=sha256:ec9bfaf3ad2df51ace80688143a6a4ebc09a248f6ff781a9945e51937008fcbc \
+    --hash=sha256:ede3e6487c5ef5d28634ba3f31f989030ad6af71edfb0055cbbd14189ff240ba \
+    --hash=sha256:f3c6818a1a86dd6dca7ddcaaf76947d5ba31aecc28cb1b67009a5877c9a64f3f \
+    --hash=sha256:f758f1b9299d059cc3f6546ae2af89670cb1c4d48ea29c3cacc4fe7de3058257 \
+    --hash=sha256:f8f0fc26ec2cc2b965b7a3b87cd19c5c6b8c5e5f436b984e85f486d652285c30 \
+    --hash=sha256:fd0409a3653af6c147209d267a0e4243f0ae46b011aa978b1080359fddc9b6cf \
+    --hash=sha256:ff18e6a727ee0ab0388507b89d1bc6a22b138d1e2fa56d1ad494586d61d2eae9 \
+    --hash=sha256:ff2983983d34813c1aeb0fa89091e76c3a22889ee83ab27c5eeb45100560c049
+    # via coverage
+ty==0.0.65 \
+    --hash=sha256:03a88493d4842889f65280ae241e06b399d57eb3c63571054cad21a4c33b3b69 \
+    --hash=sha256:0c28007bc79d648c1ddaf1e65885d07baec48eb87240da442f608e4107c1b7d8 \
+    --hash=sha256:234a321e33c7cbbfbd67bfa0b01b685dd9c21f1841781a21e5ca1fa0b25f1d5d \
+    --hash=sha256:28bcfc8898c94f079a9100e684bcf312b6a64ad3a7d4ebb35a4591546030a2cd \
+    --hash=sha256:29d2e0d34cc0a28a17ef0cf81135c5ebabc3562131f9079138ba5e7bae0f56bd \
+    --hash=sha256:306ed01f29d6e108e98feb233dbbf5878a027603b71bd3743b343977933a9f16 \
+    --hash=sha256:5a75bd0c245c38802a8f488378e74f92feb7dd33db7d63fbdd6fdf82791ba730 \
+    --hash=sha256:600b8bf6f4940cf7ffb2f43d3716faaf38dcb97cd8617c55771451bc0276408f \
+    --hash=sha256:685f49a9312bbf69d5b65bbb66384fed1f927403ea030c217b9289092d7e46c4 \
+    --hash=sha256:6f564b5ebe78e2f3a8e7b8eacb1292eb88b7c0f3c8630671cfca31abc0709cd9 \
+    --hash=sha256:9e5e1bdea9662d2b5312b4e99f319f4e6e2ea427511b5fbc546141b79ec53f76 \
+    --hash=sha256:b7134bffcc00b715fa8291e84d845782ced810a998dc1f7f11d71c85c4046325 \
+    --hash=sha256:b9424be1ec56d93ff18609fb1c0a0a2283fe1282cd6d1c7604f97d73b94d61f2 \
+    --hash=sha256:c852da96091ad22361e6586b7c7ba98e1334dcd4d8ffb67e47f4fb673de33f77 \
+    --hash=sha256:c983e156fe9e113fb56389e13d327b6b8549fe866de9b269684723a88e9b732d \
+    --hash=sha256:cf529d538f1403b14b0511e6ec3cdb95d3d974adabf24cc76cedc533368c3edc \
+    --hash=sha256:dc556c9f05408bef4c4ef02b2cc382e4e5f797b4b20d64410289848f0d76705f \
+    --hash=sha256:e3663b7396e8b1a9954e20e732de7ccb0192bf4118473069b4945920d6923921
+win32-setctime==1.2.0 ; sys_platform == 'win32' \
+    --hash=sha256:95d644c4e708aba81dc3704a116d8cbc974d70b3bdb8be1d150e36be6e9d1390 \
+    --hash=sha256:ae1fdf948f5640aae05c511ade119313fb6a30d7eabe25fef9764dca5873c4c0
+    # via loguru

src/lib.rs

@@ -2,7 +2,7 @@ use ndarray::{ArrayBase, Ix2, OwnedRepr};
 use numpy::{PyArray2, ToPyArray};
 use pyo3::exceptions;
 use pyo3::prelude::*;
-use std::path::Path;
+use std::path::PathBuf;
 
 pub mod rust_fn;
 
@@ -60,10 +60,7 @@ fn read_selected_layers(
     _py: Python<'_>,
     file_list: Vec<String>,
 ) -> PyResult<Bound<'_, PyArray2<f64>>> {
-    let path_list = file_list
+    let path_list = file_list.iter().map(PathBuf::from).collect();
-        .iter()
-        .map(|x| Path::new(x).to_path_buf())
-        .collect();
     let rs_result = rust_fn::read_selected_layers(path_list)?;
     let py_result = rs_result.to_pyarray(_py);
     Ok(py_result)

src/rust_fn/mod.rs

@@ -1,7 +1,7 @@
 use csv::ReaderBuilder;
 use glob::glob;
 use indicatif::ProgressBar;
-use ndarray::{concatenate, stack, Array1, Array2, ArrayView1, ArrayView2, Axis, Slice};
+use ndarray::{Array1, Array2, ArrayView1, ArrayView2, Axis, Slice, concatenate, stack};
 use rayon::prelude::*;
 use std::fs::File;
 use std::path::{Path, PathBuf};
@@ -37,7 +37,7 @@ pub enum ReadError {
 pub type Result<T> = std::result::Result<T, ReadError>;
 
 pub fn read_layers(folder: &str) -> Result<Array2<f64>> {
-    let glob_string: String = folder.to_owned() + "/*.pcd";
+    let glob_string = format!("{}/*.pcd", folder);
     let mut glob_iterator = glob(glob_string.as_str())?
         .collect::<std::result::Result<Vec<PathBuf>, glob::GlobError>>()?;
     glob_iterator.par_sort_unstable_by(|a, b| {
@@ -107,7 +107,7 @@ pub fn read_selected_layers(file_list: Vec<PathBuf>) -> Result<Array2<f64>> {
         .zip(z_lens.par_iter_mut())
         .try_for_each(
             |(((filepath, array_element), z_vals_element), z_lens_element)| -> Result<()> {
-                let (array, z, z_len) = read_file(filepath.to_path_buf())?;
+                let (array, z, z_len) = read_file(filepath.clone())?;
                 *array_element = array;
                 *z_vals_element = z;
                 *z_lens_element = z_len;
@@ -175,25 +175,32 @@ pub fn read_file(filepath: PathBuf) -> Result<(Array2<f64>, f64, usize)> {
         .delimiter(b' ')
         .has_headers(false)
         .from_reader(file);
-    let data = rdr
+
-        .records()
+    let mut flat_data = Vec::new();
-        .collect::<std::result::Result<Vec<csv::StringRecord>, _>>()?
+    let mut width = 0;
-        .iter()
+    let mut length = 0;
-        .map(|x| {
+
-            x.iter()
+    for result in rdr.records() {
-                .map(|y| y.parse::<i64>().map_err(ReadError::ParseIntError))
+        let record = result?;
-                .collect::<Result<Vec<i64>>>()
+        length += 1;
-        })
+
-        .collect::<Result<Vec<_>>>()?;
+        if width == 0 {
-    let length = data.len();
+            width = record.len();
-    let width = data[0].len(); // WARNING: assumes fixed width columns!
+        } else if record.len() != width {
-    let mut arr: Array2<f64> = Array2::zeros((length, width));
+            return Err(ReadError::MiscError(format!(
-    for (data_row, mut arr_row) in data.iter().zip(arr.axis_iter_mut(Axis(0))) {
+                "Inconsistent row width: expected {}, found {}",
-        for (data_i, arr_i) in data_row.iter().zip(arr_row.iter_mut()) {
+                width,
-            *arr_i = *data_i as f64
+                record.len()
+            )));
+        }
+
+        for field in record.iter() {
+            flat_data.push(field.parse::<f64>()?);
         }
     }
 
+    let arr = Array2::from_shape_vec((length, width), flat_data)?;
+
     Ok((arr, z, length))
 }
 
@@ -236,7 +243,7 @@ mod tests {
     };
     use std::path::PathBuf;
     use tar::Archive;
-    use tempfile::{tempdir, TempDir};
+    use tempfile::{TempDir, tempdir};
     use xz::read::XzDecoder;
 
     const TEST_DATA_FILE: &str = "tests/correct.tar.xz";
@@ -354,7 +361,7 @@ mod tests {
             }
         }
 
-        if buffer.len() > 0 {
+        if !buffer.is_empty() {
             let flexbuf = Reader::get_root(buffer.as_slice())?;
             let ar: Array1<f64> = Array1::deserialize(flexbuf)?;
             Ok(ar)
@@ -382,12 +389,14 @@ mod tests {
         let true_x = unpack_test_data("correct_x_out.flex").unwrap();
         let mut test_x = Array::range(-1000000., 1000000., 1.);
         test_x.par_map_inplace(rust_fn::correct_x);
-        assert!(true_x
+        assert!(
+            true_x
                 .iter()
                 .zip(test_x.iter())
                 .all(|(&x, y): (&f64, &f64)| -> bool {
                     x.ulps_eq(y, f64::default_epsilon(), f64::default_max_ulps())
-            }));
+                })
+        );
     }
 
     #[test]
@@ -405,11 +414,13 @@ mod tests {
         let true_y = unpack_test_data("correct_y_out.flex").unwrap();
         let mut test_y = Array::range(-1000000., 1000000., 1.);
         test_y.par_map_inplace(rust_fn::correct_y);
-        assert!(true_y
+        assert!(
+            true_y
                 .iter()
                 .zip(test_y.iter())
                 .all(|(&x, y): (&f64, &f64)| -> bool {
                     x.ulps_eq(y, f64::default_epsilon(), f64::default_max_ulps())
-            }));
+                })
+        );
     }
 }

tests/test_read_layers.py

@@ -34,11 +34,11 @@ def write_layers_to_dir(dir_path):
 # Sorts arrays without mixing datapoints
 # This is needed because we dont need to guarantee read order
 def sort_result(ar):
-    ar = ar[ar[:, 4].argsort()]
+    ar = ar[ar[:, 4].argsort(kind='stable')]
-    ar = ar[ar[:, 3].argsort()]
+    ar = ar[ar[:, 3].argsort(kind='stable')]
-    ar = ar[ar[:, 0].argsort()]
+    ar = ar[ar[:, 0].argsort(kind='stable')]
-    ar = ar[ar[:, 1].argsort()]
+    ar = ar[ar[:, 1].argsort(kind='stable')]
-    ar = ar[ar[:, 2].argsort()]
+    ar = ar[ar[:, 2].argsort(kind='stable')]
     return ar