pip-deps(deps): bump the python-dependencies group across 1 directory with 13 updates

---
updated-dependencies:
- dependency-name: maturin
  dependency-version: 1.11.5
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: python-dependencies
- dependency-name: numpy
  dependency-version: 2.4.1
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: python-dependencies
- dependency-name: ruff
  dependency-version: 0.14.13
  dependency-type: direct:development
  update-type: version-update:semver-patch
  dependency-group: python-dependencies
- dependency-name: sphinxcontrib-rust
  dependency-version: 1.0.1
  dependency-type: direct:development
  update-type: version-update:semver-patch
  dependency-group: python-dependencies
- dependency-name: anyio
  dependency-version: 4.12.1
  dependency-type: indirect
  update-type: version-update:semver-patch
  dependency-group: python-dependencies
- dependency-name: certifi
  dependency-version: 2026.1.4
  dependency-type: indirect
  update-type: version-update:semver-major
  dependency-group: python-dependencies
- dependency-name: coverage
  dependency-version: 7.13.1
  dependency-type: indirect
  update-type: version-update:semver-patch
  dependency-group: python-dependencies
- dependency-name: librt
  dependency-version: 0.7.8
  dependency-type: indirect
  update-type: version-update:semver-patch
  dependency-group: python-dependencies
- dependency-name: pathspec
  dependency-version: 1.0.3
  dependency-type: indirect
  update-type: version-update:semver-major
  dependency-group: python-dependencies
- dependency-name: soupsieve
  dependency-version: 2.8.2
  dependency-type: indirect
  update-type: version-update:semver-patch
  dependency-group: python-dependencies
- dependency-name: starlette
  dependency-version: 0.52.1
  dependency-type: indirect
  update-type: version-update:semver-minor
  dependency-group: python-dependencies
- dependency-name: urllib3
  dependency-version: 2.6.3
  dependency-type: indirect
  update-type: version-update:semver-patch
  dependency-group: python-dependencies
- dependency-name: websockets
  dependency-version: '16.0'
  dependency-type: indirect
  update-type: version-update:semver-major
  dependency-group: python-dependencies
...

Signed-off-by: dependabot[bot] <support@github.com>

.github/CODEOWNERS

@@ -0,0 +1 @@
+* @Cian-H

.github/dependabot.yml

@@ -2,6 +2,10 @@ version: 2
 updates:
   - package-ecosystem: "cargo"
     directory: "/"
+    groups:
+      rust-dependencies:
+        patterns:
+          - "*"
     schedule:
       interval: "weekly"
       day: "monday"
@@ -9,8 +13,6 @@ updates:
     open-pull-requests-limit: 10
     allow:
       - dependency-type: "all"
-    reviewers:
-      - "Cian-H"
     assignees:
       - "Cian-H"
     commit-message:
@@ -19,6 +21,10 @@ updates:
 
   - package-ecosystem: "pip"
     directory: "/"
+    groups:
+      python-dependencies:
+        patterns:
+          - "*"
     schedule:
       interval: "weekly"
       day: "monday"
@@ -26,8 +32,6 @@ updates:
     open-pull-requests-limit: 10
     allow:
       - dependency-type: "all"
-    reviewers:
-      - "Cian-H"
     assignees:
       - "Cian-H"
     commit-message:
@@ -36,6 +40,10 @@ updates:
       include: "scope"
 
   - package-ecosystem: "github-actions"
+    groups:
+      action-dependencies:
+        patterns:
+          - "*"
     directory: "/"
     schedule:
       interval: "weekly"

.github/workflows/CI.yml

@@ -11,7 +11,7 @@ on:
       - main
       - master
     tags:
-      - '*'
+      - "*"
   pull_request:
   workflow_dispatch:
 
@@ -37,8 +37,8 @@ jobs:
           - runner: ubuntu-22.04
             target: ppc64le
     steps:
-      - uses: actions/checkout@v4
+      - uses: actions/checkout@v5
-      - uses: actions/setup-python@v5
+      - uses: actions/setup-python@v6
         with:
           python-version: 3.x
       - name: Build wheels
@@ -75,8 +75,8 @@ jobs:
           - runner: ubuntu-22.04
             target: armv7
     steps:
-      - uses: actions/checkout@v4
+      - uses: actions/checkout@v5
-      - uses: actions/setup-python@v5
+      - uses: actions/setup-python@v6
         with:
           python-version: 3.x
       - name: Build wheels
@@ -109,8 +109,8 @@ jobs:
           - runner: windows-latest
             target: x86
     steps:
-      - uses: actions/checkout@v4
+      - uses: actions/checkout@v5
-      - uses: actions/setup-python@v5
+      - uses: actions/setup-python@v6
         with:
           python-version: 3.x
           architecture: ${{ matrix.platform.target }}
@@ -138,13 +138,15 @@ jobs:
     strategy:
       matrix:
         platform:
-          - runner: macos-13
-            target: x86_64
           - runner: macos-14
             target: aarch64
+          - runner: macos-15
+            target: aarch64
+          - runner: macos-15-intel
+            target: aarch64
     steps:
-      - uses: actions/checkout@v4
+      - uses: actions/checkout@v5
-      - uses: actions/setup-python@v5
+      - uses: actions/setup-python@v6
         with:
           python-version: 3.x
       - name: Build wheels
@@ -168,7 +170,7 @@ jobs:
   sdist:
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v4
+      - uses: actions/checkout@v5
       - name: Build sdist
         uses: PyO3/maturin-action@v1
         with:
@@ -193,11 +195,11 @@ jobs:
       # Used to generate artifact attestation
       attestations: write
     steps:
-      - uses: actions/download-artifact@v4
+      - uses: actions/download-artifact@v5
       - name: Generate artifact attestation
-        uses: actions/attest-build-provenance@v2
+        uses: actions/attest-build-provenance@v3
         with:
-          subject-path: 'wheels-*/*'
+          subject-path: "wheels-*/*"
       - name: Publish to PyPI
         if: ${{ startsWith(github.ref, 'refs/tags/') }}
         uses: PyO3/maturin-action@v1

.github/workflows/python.yaml

@@ -20,9 +20,9 @@ jobs:
         poetry-version: ["latest"]
 
     steps:
-    - uses: actions/checkout@v4
+    - uses: actions/checkout@v5
     - name: Set up Python ${{ matrix.python-version }}
-      uses: actions/setup-python@v5
+      uses: actions/setup-python@v6
       with:
         python-version: ${{ matrix.python-version }}
     - name: Install Act dependencies

.github/workflows/rust.yaml

@@ -20,9 +20,9 @@ jobs:
         os: [ubuntu-latest, windows-latest]
 
     steps:
-    - uses: actions/checkout@v4
+    - uses: actions/checkout@v5
     - name: Set up Python
-      uses: actions/setup-python@v5
+      uses: actions/setup-python@v6
       with:
         python-version: "3.12"
     - name: Install Act dependencies

.github/workflows/tagging.yml

@@ -6,6 +6,7 @@ on:
       - main
 
 permissions:
+  actions: write
   contents: write
 
 jobs:
@@ -13,7 +14,7 @@ jobs:
     runs-on: ubuntu-latest
     steps:
       - name: Checkout Repository
-        uses: actions/checkout@v4
+        uses: actions/checkout@v5
         with:
           fetch-depth: 0
 
@@ -32,20 +33,20 @@ jobs:
             echo "TAG_EXISTS=true" >> $GITHUB_ENV
           else
             echo "TAG_EXISTS=false" >> $GITHUB_ENV
+            echo "VERSION=$VERSION" >> $GITHUB_ENV
           fi
 
       - name: Create and Push Git Tag
         if: env.TAG_EXISTS == 'false'
         run: |
-          VERSION=${{ fromJson(steps.info.outputs.object).package.version }}
           git config --global user.name "github-actions[bot]"
           git config --global user.email "github-actions[bot]@users.noreply.github.com"
-          git tag "$VERSION"
+          git tag "${{ env.VERSION }}"
-          git push origin "$VERSION"
+          git push origin "${{ env.VERSION }}"
 
       - name: Trigger Release Workflow
         if: env.TAG_EXISTS == 'false'
-        uses: actions/github-script@v7
+        uses: actions/github-script@v8
         with:
           github-token: ${{ secrets.GITHUB_TOKEN }}
           script: |
@@ -53,5 +54,5 @@ jobs:
               owner: context.repo.owner,
               repo: context.repo.repo,
               workflow_id: 'CI.yml',
-              ref: 'main'
+              ref: '${{ env.VERSION }}'  // <-- This is the key change!
             })

Cargo.toml

@@ -1,6 +1,6 @@
 [package]
 name = "read_aconity_layers"
-version = "0.4.5"
+version = "0.4.10"
 edition = "2021"
 
 [lib]
@@ -9,13 +9,13 @@ path = "src/lib.rs"
 crate-type = ["cdylib"]
 
 [dependencies]
-csv = "*"
+csv = "1.3.0"
-glob = "*"
+glob = "0.3.2"
-indicatif = "*"
+indicatif = "0.18.0"
 ndarray = { version = "0.16.1", features = ["rayon"] }
 numpy = "0.25.0"
 pyo3 = { version = "0.25.0", features = ["abi3-py311", "extension-module"] }
-rayon = "*"
+rayon = "1.10.0"
 thiserror = "2.0.12"
 
 [dev-dependencies]

README.rst

@@ -34,6 +34,7 @@
 
 A library for fast reading of layer data from the aconity mini powder
 bed fusion machine.
+
 ##########
  Overview
 ##########

docs/readme_top.rst

@@ -34,3 +34,4 @@
 
 A library for fast reading of layer data from the aconity mini powder
 bed fusion machine.
+

pyproject.toml

@@ -12,9 +12,6 @@ license = { text = "MIT" }
 readme = "README.rst"
 dynamic = ["version"]
 
-[project.urls]
-github = "https://github.com/Cian-H/read_aconity_layers"
-
 [tool.poetry]
 name = "read_aconity_layers"
 description = "A utility for fast reading of layer data from the aconity mini powder bed fusion machine"
@@ -23,25 +20,30 @@ license = "MIT"
 readme = "README.rst"
 package-mode = false
 
+[tool.poetry.urls]
+repository = "https://github.com/Cian-H/read_aconity_layers"
+documentation = "https://read-aconity-layers.readthedocs.io/"
+
+
 [tool.poetry.dependencies]
 python = "^3.11"
 maturin = "^1.8.6"
 numpy = ">=2.0.0,<3.0.0"
 
 [tool.poetry.group.dev.dependencies]
-ruff = "^0.11.11"
+ruff = ">=0.11.11,<0.15.0"
 mypy = "^1.15.0"
-pytest = "^8.3.5"
+pytest = ">=8.3.5,<10.0.0"
 loguru = "^0.7.3"
-pytest-cov = "^6.1.1"
+pytest-cov = ">=6.1.1,<8.0.0"
 
 [tool.poetry.group.docs.dependencies]
 sphinx = "^8.2.3"
 sphinx-autodoc-typehints = "^3.2.0"
 sphinx-copybutton = "^0.5.2"
-sphinxcontrib-rust = "^0.8.1"
+sphinxcontrib-rust = ">=0.8.1,<1.1.0"
 myst-parser = "^4.0.1"
-sphinx-autobuild = "^2024.10.3"
+sphinx-autobuild = ">=2024.10.3,<2026.0.0"
 pydata-sphinx-theme = "^0.16.1"
 
 [build-system]

requirements.txt

@@ -1,70 +1,88 @@
-maturin==1.8.6 ; python_version >= "3.11" and python_version < "4.0" \
+maturin==1.11.5 ; python_version >= "3.11" and python_version < "4.0" \
-    --hash=sha256:0e0dc2e0bfaa2e1bd238e0236cf8a2b7e2250ccaa29c1aa8d0e61fa664b0289d \
+    --hash=sha256:1c27a2eb47821edf26c75d100b3150b52dca2c1a5f074d7514af06f7a7acb9d5 \
-    --hash=sha256:1bf4c743dd2b24448e82b8c96251597818956ddf848e1d16b59356512c7e58d8 \
+    --hash=sha256:2079447967819b5cf615e5b5b99a406d662effdc8d6afd493dcd253c6afc3707 \
-    --hash=sha256:24f66624db69b895b134a8f1592efdf04cd223c9b3b65243ad32080477936d14 \
+    --hash=sha256:2a4e872fb78e77748217084ffeb59de565d08a86ccefdace054520aaa7b66db4 \
-    --hash=sha256:4dd2e2f005ca63ac7ef0dddf2d65324ee480277a11544dcc4e7e436af68034dd \
+    --hash=sha256:2a596eab137cb3e169b97e89a739515abfa7a8755e2e5f0fc91432ef446f74f4 \
-    --hash=sha256:4ea89cf76048bc760e12b36b608fc3f5ef4f7359c0895e9afe737be34041d948 \
+    --hash=sha256:49f85ce6cbe478e9743ecddd6da2964afc0ded57013aa4d054256be702d23d40 \
-    --hash=sha256:5c0ff7ad43883920032b63c94c76dcdd5758710d7b72b68db69e7826c40534ac \
+    --hash=sha256:50f6c668c1d5d4d4dc1c3ffec7b4270dab493e5b2368f8e4213f4bcde6a50eea \
-    --hash=sha256:62a65f70ebaadd6eb6083f5548413744f2ef12400445778e08d41d4facf15bbe \
+    --hash=sha256:70d3e5beffb9ef9dfae5f3c1a7eeb572091505eb8cb076e9434518df1c42a73b \
-    --hash=sha256:6bc9281b90cd37e2a7985f2e5d6e3d35a1d64cf6e4d04ce5ed25603d162995b9 \
+    --hash=sha256:7579cf47640fb9595a19fe83a742cbf63203f0343055c349c1cab39045a30c29 \
-    --hash=sha256:b0637604774e2c50ab48a0e9023fe2f071837ecbc817c04ec28e1cfcc25224c2 \
+    --hash=sha256:8127d2cd25950bacbcdc8a2ec6daab1d4d27200f7d73964392680ad64d27f7f0 \
-    --hash=sha256:b1e786ec9b5f7315c7e3fcc62b0715f9d99ffe477b06d0d62655a71e6a51a67b \
+    --hash=sha256:9348f7f0a346108e0c96e6719be91da4470bd43c15802435e9f4157f5cca43d4 \
-    --hash=sha256:bec5948c6475954c8089b17fae349966258756bb2ca05e54099e476a08070795 \
+    --hash=sha256:c739b243d012386902f112ea63a54a94848932b70ae3565fa5e121fd1c0200e0 \
-    --hash=sha256:ca30fdb158a24cf312f3e53072a6e987182c103fa613efea2d28b5f52707d04a \
+    --hash=sha256:edd1d4d35050ea2b9ef42aa01e87fe019a1e822940346b35ccb973e0aa8f6d82 \
-    --hash=sha256:dade5edfaf508439ff6bbc7be4f207e04c0999c47d9ef7e1bae16258e76b1518
+    --hash=sha256:f1320dacddcd3aa84a4bdfc77ee6fdb60e4c3835c853d7eb79c09473628b0498 \
-numpy==2.2.6 ; python_version >= "3.11" and python_version < "4.0" \
+    --hash=sha256:ffe7418834ff3b4a6c987187b7abb85ba033f4733e089d77d84e2de87057b4e7
-    --hash=sha256:038613e9fb8c72b0a41f025a7e4c3f0b7a1b5d768ece4796b674c8f3fe13efff \
+numpy==2.4.1 ; python_version >= "3.11" and python_version < "4.0" \
-    --hash=sha256:0678000bb9ac1475cd454c6b8c799206af8107e310843532b04d49649c717a47 \
+    --hash=sha256:0093e85df2960d7e4049664b26afc58b03236e967fb942354deef3208857a04c \
-    --hash=sha256:0811bb762109d9708cca4d0b13c4f67146e3c3b7cf8d34018c722adb2d957c84 \
+    --hash=sha256:09aa8a87e45b55a1c2c205d42e2808849ece5c484b2aab11fecabec3841cafba \
-    --hash=sha256:0b605b275d7bd0c640cad4e5d30fa701a8d59302e127e5f79138ad62762c3e3d \
+    --hash=sha256:0cce2a669e3c8ba02ee563c7835f92c153cf02edff1ae05e1823f1dde21b16a5 \
-    --hash=sha256:0bca768cd85ae743b2affdc762d617eddf3bcf8724435498a1e80132d04879e6 \
+    --hash=sha256:0e6e8f9d9ecf95399982019c01223dc130542960a12edfa8edd1122dfa66a8a8 \
-    --hash=sha256:1bc23a79bfabc5d056d106f9befb8d50c31ced2fbc70eedb8155aec74a45798f \
+    --hash=sha256:0f118ce6b972080ba0758c6087c3617b5ba243d806268623dc34216d69099ba0 \
-    --hash=sha256:287cc3162b6f01463ccd86be154f284d0893d2b3ed7292439ea97eafa8170e0b \
+    --hash=sha256:178de8f87948163d98a4c9ab5bee4ce6519ca918926ec8df195af582de28544d \
-    --hash=sha256:37c0ca431f82cd5fa716eca9506aefcabc247fb27ba69c5062a6d3ade8cf8f49 \
+    --hash=sha256:18e14c4d09d55eef39a6ab5b08406e84bc6869c1e34eef45564804f90b7e0574 \
-    --hash=sha256:37e990a01ae6ec7fe7fa1c26c55ecb672dd98b19c3d0e1d1f326fa13cb38d163 \
+    --hash=sha256:2023ef86243690c2791fd6353e5b4848eedaa88ca8a2d129f462049f6d484696 \
-    --hash=sha256:389d771b1623ec92636b0786bc4ae56abafad4a4c513d36a55dce14bd9ce8571 \
+    --hash=sha256:20d4649c773f66cc2fc36f663e091f57c3b7655f936a4c681b4250855d1da8f5 \
-    --hash=sha256:3d70692235e759f260c3d837193090014aebdf026dfd167834bcba43e30c2a42 \
+    --hash=sha256:2302dc0224c1cbc49bb94f7064f3f923a971bfae45c33870dcbff63a2a550505 \
-    --hash=sha256:41c5a21f4a04fa86436124d388f6ed60a9343a6f767fced1a8a71c3fbca038ff \
+    --hash=sha256:26f0bcd9c79a00e339565b303badc74d3ea2bd6d52191eeca5f95936cad107d0 \
-    --hash=sha256:481b49095335f8eed42e39e8041327c05b0f6f4780488f61286ed3c01368d491 \
+    --hash=sha256:297c72b1b98100c2e8f873d5d35fb551fce7040ade83d67dd51d38c8d42a2162 \
-    --hash=sha256:4eeaae00d789f66c7a25ac5f34b71a7035bb474e679f410e5e1a94deb24cf2d4 \
+    --hash=sha256:2f44de05659b67d20499cbc96d49f2650769afcb398b79b324bb6e297bfe3844 \
-    --hash=sha256:55a4d33fa519660d69614a9fad433be87e5252f4b03850642f88993f7b2ca566 \
+    --hash=sha256:2ffd257026eb1b34352e749d7cc1678b5eeec3e329ad8c9965a797e08ccba205 \
-    --hash=sha256:5a6429d4be8ca66d889b7cf70f536a397dc45ba6faeb5f8c5427935d9592e9cf \
+    --hash=sha256:382ad67d99ef49024f11d1ce5dcb5ad8432446e4246a4b014418ba3a1175a1f4 \
-    --hash=sha256:5bd4fc3ac8926b3819797a7c0e2631eb889b4118a9898c84f585a54d475b7e40 \
+    --hash=sha256:3869ea1ee1a1edc16c29bbe3a2f2a4e515cc3a44d43903ad41e0cacdbaf733dc \
-    --hash=sha256:5beb72339d9d4fa36522fc63802f469b13cdbe4fdab4a288f0c441b74272ebfd \
+    --hash=sha256:3d1a100e48cb266090a031397863ff8a30050ceefd798f686ff92c67a486753d \
-    --hash=sha256:6031dd6dfecc0cf9f668681a37648373bddd6421fff6c66ec1624eed0180ee06 \
+    --hash=sha256:423797bdab2eeefbe608d7c1ec7b2b4fd3c58d51460f1ee26c7500a1d9c9ee93 \
-    --hash=sha256:71594f7c51a18e728451bb50cc60a3ce4e6538822731b2933209a1f3614e9282 \
+    --hash=sha256:42d7dd5fa36d16d52a84f821eb96031836fd405ee6955dd732f2023724d0aa01 \
-    --hash=sha256:74d4531beb257d2c3f4b261bfb0fc09e0f9ebb8842d82a7b4209415896adc680 \
+    --hash=sha256:49e792ec351315e16da54b543db06ca8a86985ab682602d90c60ef4ff4db2a9c \
-    --hash=sha256:7befc596a7dc9da8a337f79802ee8adb30a552a94f792b9c9d18c840055907db \
+    --hash=sha256:4e53170557d37ae404bf8d542ca5b7c629d6efa1117dac6a83e394142ea0a43f \
-    --hash=sha256:894b3a42502226a1cac872f840030665f33326fc3dac8e57c607905773cdcde3 \
+    --hash=sha256:4f1b68ff47680c2925f8063402a693ede215f0257f02596b1318ecdfb1d79e33 \
-    --hash=sha256:8e41fd67c52b86603a91c1a505ebaef50b3314de0213461c7a6e99c9a3beff90 \
+    --hash=sha256:4f9c360ecef085e5841c539a9a12b883dff005fbd7ce46722f5e9cef52634d82 \
-    --hash=sha256:8e9ace4a37db23421249ed236fdcdd457d671e25146786dfc96835cd951aa7c1 \
+    --hash=sha256:529050522e983e00a6c1c6b67411083630de8b57f65e853d7b03d9281b8694d2 \
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+    --hash=sha256:52b5f61bdb323b566b528899cc7db2ba5d1015bda7ea811a8bcf3c89c331fa42 \
-    --hash=sha256:9551a499bf125c1d4f9e250377c1ee2eddd02e01eac6644c080162c0c51778ab \
+    --hash=sha256:538bf4ec353709c765ff75ae616c34d3c3dca1a68312727e8f2676ea644f8509 \
-    --hash=sha256:b0544343a702fa80c95ad5d3d608ea3599dd54d4632df855e4c8d24eb6ecfa1c \
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